RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 A0A1B0GVT2 93 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 C4orf47A7E2U8 309 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 C10orf142B7Z368 130 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 SLC31A1O15431 190 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 SLCO2B1O94956 709 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 PCCBP05166 539 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 SH3BP2P78314 561 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 CLCQ05315 142 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 ACTN3Q08043 901 aaPredicted RBP17.06■□□□□ 0.32
SRSF1-201ENST00000258962 SGCGQ13326 291 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 PUM1Q14671 1186 aaKnown RBP eCLIP17.06■□□□□ 0.32
SRSF1-201ENST00000258962 CACNA1EQ15878 2313 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
SRSF1-201ENST00000258962 FAM91A1Q658Y4 838 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 IL27RAQ6UWB1 636 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 RASGRP3Q8IV61 690 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 TRPC4APQ8TEL6 797 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 STON2Q8WXE9 905 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 KLK6Q92876 244 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 HIC2Q96JB3 615 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 SLC6A18Q96N87 628 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 OR52B2Q96RD2 323 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 CCM2Q9BSQ5 444 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 NUF2Q9BZD4 464 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 ZCCHC2Q9C0B9 1178 aaKnown RBP17.06■□□□□ 0.32
SRSF1-201ENST00000258962 RDH14Q9HBH5 336 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 ZBTB26Q9HCK0 441 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 TRIM39Q9HCM9 518 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 GULP1Q9UBP9 304 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
SRSF1-201ENST00000258962 SLCO1B1Q9Y6L6 691 aa17.06■□□□□ 0.32
SRSF1-201ENST00000258962 A0A1B0GTL3 188 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 SLC5A10A0PJK1 596 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 PRAMEF26H0Y7S4 382 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 MYO1CO00159 1063 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 E2F3O00716 465 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 SLC30A4O14863 429 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 TAPBPO15533 448 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 HNRNPCL1O60812 293 aaKnown RBP17.05■□□□□ 0.32
SRSF1-201ENST00000258962 SERPINA6P08185 405 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 T-ENOLP0DO92 83 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 CD38P28907 300 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 RASSF2P50749 326 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 NCALDP61601 193 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 GRIK2Q13002 908 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 PCBP2Q15366 365 aaKnown RBP eCLIP17.05■□□□□ 0.328e-10■■□□□ 12.9
SRSF1-201ENST00000258962 UAP1L1Q3KQV9 507 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 TMEM259Q4ZIN3 620 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 XKR5Q6UX68 686 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 NEK10Q6ZWH5 1172 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 HEATR4Q86WZ0 1026 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 MINDY1Q8N5J2 469 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 LILRA3Q8N6C8 439 aaPredicted RBP17.05■□□□□ 0.32
SRSF1-201ENST00000258962 AGAP11Q8TF27 550 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 ASZ1Q8WWH4 475 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 RTKNQ9BST9 563 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 C1QTNF2Q9BXJ5 285 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 SLC17A9Q9BYT1 436 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 WDR55Q9H6Y2 383 aaPredicted RBP17.05■□□□□ 0.32
SRSF1-201ENST00000258962 MBNL1Q9NR56 388 aaKnown RBP17.05■□□□□ 0.32
SRSF1-201ENST00000258962 TXLNGQ9NUQ3 528 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 ARMCX1Q9P291 453 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 FAM8A1Q9UBU6 413 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 PTBP2Q9UKA9 531 aaKnown RBP17.05■□□□□ 0.32
SRSF1-201ENST00000258962 PRDM4Q9UKN5 801 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 FIS1Q9Y3D6 152 aa17.05■□□□□ 0.32
SRSF1-201ENST00000258962 H0YHG0 523 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 CDX4O14627 284 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 VILLO15195 856 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 GUCA1CO95843 209 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 S100BP04271 92 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 C8GP07360 202 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 ZNF8P17098 575 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 VCLP18206 1134 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 PBLDP30039 288 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 AKT2P31751 481 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 NAA20P61599 178 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 BTKQ06187 659 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 LCP2Q13094 533 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 IRF4Q15306 451 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 MBOAT1Q6ZNC8 495 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 UBE2R2Q712K3 238 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 ZNF547Q8IVP9 402 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 TP53I13Q8NBR0 393 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 ASB11Q8WXH4 323 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 GLMNQ92990 594 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 PPP1R36Q96LQ0 422 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 TMEM79Q9BSE2 394 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 MID1IP1Q9NPA3 183 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 SEMA4BQ9NPR2 832 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 PDE10AQ9Y233 779 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 TRAF6Q9Y4K3 522 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 PCYT1BQ9Y5K3 369 aaPredicted RBP17.04■□□□□ 0.32
SRSF1-201ENST00000258962 CFAP54Q96N23 3096 aa17.04■□□□□ 0.32
SRSF1-201ENST00000258962 GOLGA8QA0A0J9YX86 632 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 GOLGA8OA6NCC3 632 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 CAPN14A8MX76 684 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 GOLGA8NF8WBI6 632 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 GFYI3L273 518 aa17.03■□□□□ 0.32
SRSF1-201ENST00000258962 SDHDO14521 159 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms