RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 PPM1JQ5JR12 505 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 SBSNQ6UWP8 590 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 EFL1Q7Z2Z2 1120 aaKnown RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 SPRED1Q7Z699 444 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 TRABD2AQ86V40 505 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 PHC3Q8NDX5 983 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 OR52E1Q8NGJ3 308 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 RHEBL1Q8TAI7 183 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 SKA2Q8WVK7 121 aaPredicted RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 KIAA1191Q96A73 305 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 CCDC74AQ96AQ1 378 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 PGM2Q96G03 612 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 GPR78Q96P69 363 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 FERD3LQ96RJ6 166 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 RTKNQ9BST9 563 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 NMRAL1Q9HBL8 299 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 TOR4AQ9NXH8 423 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 SPATA7Q9P0W8 599 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 TBK1Q9UHD2 729 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 ADAMTS6Q9UKP5 1117 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 IKZF3Q9UKT9 509 aa13.72□□□□□ -0.21
VPS25-201ENST00000253794 CDV3Q9UKY7 258 aaKnown RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 RUVBL2Q9Y230 463 aaKnown RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 GOLGA4Q13439 2230 aaKnown RBP13.72□□□□□ -0.21
VPS25-201ENST00000253794 RHPN2P1A8MT19 583 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 ZW10O43264 779 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 GSTA1P08263 222 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 CDK4P11802 303 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 MYF5P13349 255 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 CYP2A7P20853 494 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 AP1S2P56377 157 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 CDKL1Q00532 357 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 IRF9Q00978 393 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 SLC18A2Q05940 514 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 ARHGAP19Q14CB8 494 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 ACAP2Q15057 778 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
VPS25-201ENST00000253794 TSNAXIP1Q2TAA8 658 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 KRT71Q3SY84 523 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 CDKL4Q5MAI5 379 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 PERM1Q5SV97 790 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 TTC23LQ6PF05 361 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 UBE2R2Q712K3 238 aaPredicted RBP13.71□□□□□ -0.21
VPS25-201ENST00000253794 HDXQ7Z353 690 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
VPS25-201ENST00000253794 DEFB124Q8NES8 71 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 WDR48Q8TAF3 677 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 IFI44Q8TCB0 444 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 KCTD4Q8WVF5 259 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 HGH1Q9BTY7 390 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 PARVBQ9HBI1 364 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 MKS1Q9NXB0 559 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 SENP1Q9P0U3 644 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 PDE10AQ9Y233 779 aa13.71□□□□□ -0.21
VPS25-201ENST00000253794 IGHV1OR21-1A0A087WYE8 117 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 TLDC2A0PJX2 215 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 SMIM23A6NLE4 172 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CDC7O00311 574 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 BTN3A1O00481 513 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 NTN3O00634 580 aaPredicted RBP13.7□□□□□ -0.22
VPS25-201ENST00000253794 MAP2K7O14733 419 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 MT-ND3P03897 115 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 KRT15P19012 456 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 PKLRP30613 574 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 SHMT2P34897 504 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 HSD17B2P37059 387 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 BDKRB1P46663 353 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 RAB28P51157 221 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CSHL1Q14406 222 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 KRT33BQ14525 404 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CYP2A13Q16696 494 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 PHKG1Q16816 387 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 RSPO4Q2I0M5 234 aaPredicted RBP13.7□□□□□ -0.22
VPS25-201ENST00000253794 CCSMST1Q4G0I0 132 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CEP85LQ5SZL2 805 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 ISCA2Q86U28 154 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
VPS25-201ENST00000253794 OR9A1PQ8NGU1 263 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CFAP61Q8NHU2 1237 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 MCOLN3Q8TDD5 553 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 DENND1AQ8TEH3 1009 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 PTERQ96BW5 349 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 NXNL1Q96CM4 212 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 SLC38A3Q99624 504 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 CCDC3Q9BQI4 270 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 VPS11Q9H270 941 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 OR6C2Q9NZP2 312 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 OGFRQ9NZT2 677 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 EPHA6Q9UF33 1036 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 ICKQ9UPZ9 632 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 OARD1Q9Y530 152 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 ACTL7BQ9Y614 415 aa13.7□□□□□ -0.22
VPS25-201ENST00000253794 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms