RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CBX4O00257 560 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 TSPAN3O60637 253 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 RHOCP08134 193 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 RAD51Q06609 339 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ELAVL2Q12926 359 aaKnown RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 PRKG2Q13237 762 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 PTPRNQ16849 979 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 C6orf136Q5SQH8 315 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 CNIH3Q8TBE1 160 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 NUDT8Q8WV74 236 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 WBP2Q969T9 261 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 YIPF6Q96EC8 236 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ZNF300Q96RE9 604 aaPredicted RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 TSEN34Q9BSV6 310 aaKnown RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 UGT2B28Q9BY64 529 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ATP11BQ9Y2G3 1177 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 A0A0U1RQS6 177 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 NPEPPSL1A6NEC2 478 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 C2orf81A6NN90 581 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 CLDN11O75508 207 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 STC2O76061 302 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 CCDC159P0C7I6 412 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 PSMA3P25788 255 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 CD40LGP29965 261 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 CD6P30203 668 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ACOX1Q15067 660 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 HABP4Q5JVS0 413 aaKnown RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 SPESP1Q6UW49 350 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 C16orf59Q7L2K0 433 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ARMC8Q8IUR7 673 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 FRS2Q8WU20 508 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 RORBQ92753 470 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 FUBP1Q96AE4 644 aaKnown RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 ZNF583Q96ND8 569 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 CDK5RAP1Q96SZ6 601 aaKnown RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 FKBPLQ9UIM3 349 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ARIH1Q9Y4X5 557 aaPredicted RBP18.56■□□□□ 0.56
SNX4-201ENST00000251775 RAI2Q9Y5P3 530 aa18.56■□□□□ 0.56
SNX4-201ENST00000251775 ILVBLA1L0T0 632 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 GRXCR2A6NFK2 248 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 TBKBP1A7MCY6 615 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 OR1I1O60431 355 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 UROSP10746 265 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 PTPN2P17706 415 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 CORO1AP31146 461 aaKnown RBP18.55■□□□□ 0.56
SNX4-201ENST00000251775 AGTR2P50052 363 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 CDK5R2Q13319 367 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NECAB2Q7Z6G3 386 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 TMEM179BQ7Z7N9 219 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 SVOPLQ8N434 492 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 FNDC5Q8NAU1 212 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 FIG4Q92562 907 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 BPIFA1Q9NP55 256 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 ZNF229Q9UJW7 825 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 FBXO10Q9UK96 956 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NCF1BA6NI72 391 aaPredicted RBP18.55■□□□□ 0.56
SNX4-201ENST00000251775 NCF1CA8MVU1 366 aaPredicted RBP18.55■□□□□ 0.56
SNX4-201ENST00000251775 HS6ST1O60243 411 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NIPSNAP2O75323 286 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NCF1P14598 390 aaPredicted RBP18.55■□□□□ 0.56
SNX4-201ENST00000251775 LPOP22079 712 aaPredicted RBP18.55■□□□□ 0.56
SNX4-201ENST00000251775 PRKACGP22612 351 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 TCEA1P23193 301 aaKnown RBP18.55■□□□□ 0.56
SNX4-201ENST00000251775 OR1D2P34982 312 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 MAP2K4P45985 399 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NCS1P62166 190 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 FPGSQ05932 587 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 CDC20Q12834 499 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 HECTD3Q5T447 861 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 ATAD3BQ5T9A4 648 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 PRR23BQ6ZRT6 265 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NANOGNBQ7Z5D8 188 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 NPAS4Q8IUM7 802 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 CRIPAKQ8N1N5 446 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 MCOLN3Q8TDD5 553 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 FBLIM1Q8WUP2 373 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 ZNF566Q969W8 418 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 GORASP2Q9H8Y8 452 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 ERVK-18Q9QC07 812 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 IFT52Q9Y366 437 aa18.55■□□□□ 0.56
SNX4-201ENST00000251775 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.54■□□□□ 0.56
SNX4-201ENST00000251775 LSM1O15116 133 aaKnown RBP18.54■□□□□ 0.56
SNX4-201ENST00000251775 KATNA1O75449 491 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 CHEK2O96017 543 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 SERPINB1P30740 379 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 RYKP34925 604 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 SLC13A2Q13183 592 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 ZNF177Q13360 481 aaPredicted RBP18.54■□□□□ 0.56
SNX4-201ENST00000251775 SCN5AQ14524 2016 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 P2RY8Q86VZ1 359 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 EFHBQ8N7U6 833 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 SIDT2Q8NBJ9 832 aaKnown RBP18.54■□□□□ 0.56
SNX4-201ENST00000251775 CCDC115Q96NT0 180 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 SLIRPQ9GZT3 109 aaKnown RBP18.54■□□□□ 0.56
SNX4-201ENST00000251775 ACTL8Q9H568 366 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 RETREG1Q9H6L5 497 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 SLCO3A1Q9UIG8 710 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 C3orf18Q9UK00 162 aa18.54■□□□□ 0.56
SNX4-201ENST00000251775 FNDC3AQ9Y2H6 1198 aaKnown RBP18.54■□□□□ 0.56
SNX4-201ENST00000251775 NOX1Q9Y5S8 564 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms