RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF548Q8NEK5 533 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 OR2T12Q8NG77 320 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 MCCC1Q96RQ3 725 aaPredicted RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CD320Q9NPF0 282 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 RSL24D1Q9UHA3 163 aaKnown RBP19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 MAFFQ9ULX9 164 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 CCL26Q9Y258 94 aa19.1■□□□□ 0.65
CDC42EP1-201ENST00000249014 TULP3O75386 442 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 LRG1P02750 347 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 ASLP04424 464 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 UGT2B4P06133 528 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 C1SP09871 688 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 CYP4F3Q08477 520 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 GTDC1Q4AE62 458 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 OTUD3Q5T2D3 398 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 CACHD1Q5VU97 1274 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 DET1Q7L5Y6 550 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 VRK3Q8IV63 474 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 TNIP2Q8NFZ5 429 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 FIG4Q92562 907 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 TOX2Q96NM4 488 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 CCDC115Q96NT0 180 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 THUMPD3Q9BV44 507 aaKnown RBP19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC32A1Q9H598 525 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC6A13Q9NSD5 602 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 C1orf109Q9NX04 203 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 ASIC5Q9NY37 505 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 CD84Q9UIB8 345 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 IGLV3-16A0A075B6K0 115 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 H0Y858 1186 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 PRSS23O95084 383 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 PDYNP01213 254 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 IL6P05231 212 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 RAP2AP10114 183 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 BCKDHAP12694 445 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 HSPA14Q0VDF9 509 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 ALDH16A1Q8IZ83 802 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 GLB1L3Q8NCI6 653 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLC29A3Q9BZD2 475 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 ACTR8Q9H981 624 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 THEGQ9P2T0 379 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 SLCO3A1Q9UIG8 710 aa19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 MAGED1Q9Y5V3 778 aaPredicted RBP19.09■□□□□ 0.65
CDC42EP1-201ENST00000249014 KRT87PA6NCN2 255 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 TCF3P15923 654 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 AOAHP28039 575 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 PHC1P78364 1004 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 ADARB1P78563 741 aaKnown RBP19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 NKG7Q16617 165 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 ENPP6Q6UWR7 440 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 USP51Q70EK9 711 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 UBE2R2Q712K3 238 aaPredicted RBP19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 PATL1Q86TB9 770 aaKnown RBP19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 CHST14Q8NCH0 376 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 TMBIM1Q969X1 311 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 HIC2Q96JB3 615 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 BRD9Q9H8M2 597 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 GORASP2Q9H8Y8 452 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 TUBA8Q9NY65 449 aaPredicted RBP19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 DLGAP4Q9Y2H0 992 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 PCDHGA11Q9Y5H2 935 aa19.08■□□□□ 0.65
CDC42EP1-201ENST00000249014 A0A087WXM4 84 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 ABHD14A-ACY1A0A1B0GW23 586 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 TRMUO75648 421 aaKnown RBP19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 CCL5P13501 91 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 CCR2P41597 374 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 CDK9P50750 372 aaKnown RBP19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 FAM98BQ52LJ0 330 aaKnown RBP19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 LPCAT2Q7L5N7 544 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 TMEM25Q86YD3 366 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 GALNT13Q8IUC8 556 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 SLC22A17Q8WUG5 538 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 OR52E6Q96RD3 313 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 CORO1BQ9BR76 489 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 CPEB1Q9BZB8 566 aaKnown RBP19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 ZBP1Q9H171 429 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 OCEL1Q9H607 264 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 KLHL42Q9P2K6 505 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 B4GALT6Q9UBX8 382 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 ATP11BQ9Y2G3 1177 aa19.08■□□□□ 0.64
CDC42EP1-201ENST00000249014 KRT6AP02538 564 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 KRT6BP04259 564 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 C8AP07357 584 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 KRT6CP48668 564 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 SPINT3P49223 89 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 NEK2P51955 445 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 GBX1Q14549 363 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 RUNDC3AQ59EK9 446 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 CARD16Q5EG05 197 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 ABRAXAS1Q6UWZ7 409 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 FBXO30Q8TB52 745 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 ADAMTS16Q8TE57 1224 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 SKA2Q8WVK7 121 aaPredicted RBP19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 MYLIPQ8WY64 445 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 PYCR2Q96C36 320 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 TBCDQ9BTW9 1192 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 SLC12A9Q9BXP2 914 aa19.07■□□□□ 0.64
CDC42EP1-201ENST00000249014 LIN28AQ9H9Z2 209 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms