RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TRAV19A0A0A6YYK7 116 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 H3BNX3 289 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 SMAD6O43541 496 aaKnown RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 OR10H3O60404 316 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ATP6V1G1O75348 118 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RAP2AP10114 183 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 CDH3P22223 829 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 POLR2IP36954 125 aaKnown RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 SUSD1Q6UWL2 747 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TMEM207Q6UWW9 146 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 XAGE5Q8WWM1 108 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 FAM83DQ9H4H8 585 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 EHD3Q9NZN3 535 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RIMS3Q9UJD0 308 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 LYVE1Q9Y5Y7 322 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 MITFO75030 526 aaPredicted RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 IL6P05231 212 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TNNI3P19429 210 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 PCSK6P29122 969 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ARSFP54793 590 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 DNAJB13P59910 316 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 FKBP1BP68106 108 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 CNTN1Q12860 1018 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 GPR17Q13304 367 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 USP39Q53GS9 565 aaKnown RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 RSBN1Q5VWQ0 802 aaPredicted RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 LRRC66Q68CR7 880 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 NPAS4Q8IUM7 802 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ARMC5Q96C12 935 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ISOC1Q96CN7 298 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TSPAN18Q96SJ8 248 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RNF186Q9NXI6 227 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 KCTD5Q9NXV2 234 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TMCO1Q9UM00 188 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ARID1AO14497 2285 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TNFRSF1BP20333 461 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 SLC6A4P31645 630 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 POLR2LP62875 67 aaKnown RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RFX4Q33E94 735 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 PPP4R4Q6NUP7 873 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 SERPINA13PQ6UXR4 307 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ADGRG6Q86SQ4 1221 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 APCDD1Q8J025 514 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 PGBD5Q8N414 524 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TTC29Q8NA56 475 aaPredicted RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 MDGA1Q8NFP4 955 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 AP2M1Q96CW1 435 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 TEX37Q96LM6 180 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 PSKH2Q96QS6 385 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 IL4I1Q96RQ9 567 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RTP3Q9BQQ7 232 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 A0A1B0GTL3 188 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 HPCAP84074 193 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 LSAMPQ13449 338 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 DNASE1L3Q13609 305 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RAB39AQ14964 217 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ARMC4Q5T2S8 1044 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 CERS6Q6ZMG9 384 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 YAF2Q8IY57 180 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 GPR65Q8IYL9 337 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 UBASH3BQ8TF42 649 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 CAPSLQ8WWF8 208 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 ART5Q96L15 291 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 DERL2Q9GZP9 239 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 RPF2Q9H7B2 306 aaKnown RBP13.42□□□□□ -0.26
NCLN-201ENST00000246117 PCDHB1Q9Y5F3 818 aa13.42□□□□□ -0.26
NCLN-201ENST00000246117 DLEC1Q9Y238 1755 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 TBX1O43435 398 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 EOMESO95936 686 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
NCLN-201ENST00000246117 MAP2K4P45985 399 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 SULT1C3Q6IMI6 304 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 CLEC14AQ86T13 490 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.41□□□□□ -0.26
NCLN-201ENST00000246117 FRS2Q8WU20 508 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 LTB4R2Q9NPC1 389 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 TREX1Q9NSU2 369 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.41□□□□□ -0.26
NCLN-201ENST00000246117 H3BM21 787 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 CLIC1O00299 241 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 TSC22D2O75157 780 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 GALTP07902 379 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 ENGP17813 658 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 JAK1P23458 1154 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 VBP1P61758 197 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 PMS2P3Q13401 168 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 CEP350Q5VT06 3117 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 ERAP2Q6P179 960 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 TMEM220Q6QAJ8 160 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 BLOC1S3Q6QNY0 202 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
NCLN-201ENST00000246117 EXOSC8Q96B26 276 aaKnown RBP13.41□□□□□ -0.26
NCLN-201ENST00000246117 EGLN2Q96KS0 407 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 YIPF2Q9BWQ6 316 aa13.41□□□□□ -0.26
NCLN-201ENST00000246117 CCM2LQ9NUG4 571 aaPredicted RBP13.41□□□□□ -0.26
NCLN-201ENST00000246117 H3BNH8 94 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms