RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CACNG1Q06432 222 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 DLG2Q15700 870 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TMEM198Q66K66 360 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 LYSMD3Q7Z3D4 306 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 GALNT13Q8IUC8 556 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 RAVER1Q8IY67 606 aaKnown RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 CDYL2Q8N8U2 506 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 SIPA1Q96FS4 1042 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 PPP3R2Q96LZ3 170 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 SLC29A1Q99808 456 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 DZANK1Q9NVP4 752 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 EHD3Q9NZN3 535 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 FLRT1Q9NZU1 646 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 INSL5Q9Y5Q6 135 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 FAM159BA6NKW6 160 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TP73O15350 636 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 HLA-DQB2P05538 268 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ALDH4A1P30038 563 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 S100A3P33764 101 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 DHPSP49366 369 aaPredicted RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 CHST15Q7LFX5 561 aaPredicted RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 LDB1Q86U70 411 aaPredicted RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 LILRA2Q8N149 483 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ASZ1Q8WWH4 475 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ACDQ96AP0 544 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 AGAP2Q99490 1192 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ABCG8Q9H221 673 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ZBTB26Q9HCK0 441 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TMCC3Q9ULS5 477 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 KLHL20Q9Y2M5 609 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 H0Y858 1186 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 PITPNM1O00562 1244 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TOP3BO95985 862 aaKnown RBP10.79□□□□□ -0.68
COPA-201ENST00000241704 YES1P07947 543 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 HGFP14210 728 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 DDX6P26196 483 aaKnown RBP eCLIP10.79□□□□□ -0.682e-8■□□□□ 8.4
COPA-201ENST00000241704 SPAM1P38567 509 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 SLC26A3P40879 764 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 CHRNA4P43681 627 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 SLC10A7Q0GE19 358 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 E2F2Q14209 437 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TOMM20Q15388 145 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 MSANTD2Q6P1R3 559 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 CUZD1Q86UP6 607 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 SCML4Q8N228 414 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 MPP5Q8N3R9 675 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TOR1AIP2Q8NFQ8 470 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TFAP2CQ92754 450 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TADA1Q96BN2 335 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 SLC2A13Q96QE2 648 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 NMUR1Q9HB89 426 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 C9IYK1 514 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 CCL22O00626 93 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 SOCS2O14508 198 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 ATG13O75143 517 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TNFRSF21O75509 655 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 EDN1P05305 212 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 C7P10643 843 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 OXA1LQ15070 435 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 MARCH8Q5T0T0 291 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 UBE2UQ5VVX9 321 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 DENND6AQ8IWF6 608 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 EID3Q8N140 333 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 STX19Q8N4C7 294 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 KBTBD8Q8NFY9 601 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 C3orf18Q9UK00 162 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 BBIP1A8MTZ0 92 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 BEST1O76090 585 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 GOT2P00505 430 aaKnown RBP10.79□□□□□ -0.68
COPA-201ENST00000241704 KCNQ1P51787 676 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 ACAP2Q15057 778 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 ZYG11AQ6WRX3 759 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 VASH1Q7L8A9 365 aaPredicted RBP10.79□□□□□ -0.68
COPA-201ENST00000241704 HDDC3Q8N4P3 179 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 TDRD1Q9BXT4 1180 aaKnown RBP10.79□□□□□ -0.68
COPA-201ENST00000241704 PIF1Q9H611 641 aa10.79□□□□□ -0.68
COPA-201ENST00000241704 EXOSC4Q9NPD3 245 aaKnown RBP10.79□□□□□ -0.68
COPA-201ENST00000241704 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.79□□□□□ -0.68
COPA-201ENST00000241704 ZBTB42B2RXF5 422 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 GABRDO14764 452 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 PDE9AO76083 593 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 PCCBP05166 539 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 ALPPL2P10696 532 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 ZNF26P17031 533 aaPredicted RBP10.78□□□□□ -0.68
COPA-201ENST00000241704 OGNP20774 298 aaKnown RBP10.78□□□□□ -0.68
COPA-201ENST00000241704 PWP1Q13610 501 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 UBXN11Q5T124 520 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.78□□□□□ -0.683e-9■■■■■ 37.6
COPA-201ENST00000241704 SYT12Q8IV01 421 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 HID1Q8IV36 788 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 SHKBP1Q8TBC3 707 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 MZB1Q8WU39 189 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 RANBP9Q96S59 729 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 GPR21Q99679 349 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 STOML2Q9UJZ1 356 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 COPG1Q9Y678 874 aaKnown RBP10.78□□□□□ -0.68
COPA-201ENST00000241704 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
COPA-201ENST00000241704 ATP6AP2A0A1C7CYW4 349 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms