RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MGAT2Q10469 447 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SREBF2Q12772 1141 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 TRAP1Q12931 704 aaKnown RBP7.78□□□□□ -1.16
CXCR4-201ENST00000241393 PEX6Q13608 980 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 PTK2BQ14289 1009 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 MMEL1Q495T6 779 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 NOMO2Q5JPE7 1267 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 PPM1LQ5SGD2 360 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 RBM20Q5T481 1227 aaKnown RBP7.78□□□□□ -1.16
CXCR4-201ENST00000241393 MRNIPQ6NTE8 343 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 RGMBQ6NW40 437 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SLC24A5Q71RS6 500 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CUZD1Q86UP6 607 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 TICAM1Q8IUC6 712 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 MFN1Q8IWA4 741 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 COLGALT2Q8IYK4 626 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 MARVELD2Q8N4S9 558 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 PLA2G15Q8NCC3 412 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 ARRDC2Q8TBH0 407 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SPPL2BQ8TCT7 592 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 HASPINQ8TF76 798 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 TRIB2Q92519 343 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 ASB9Q96DX5 294 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 DUS3LQ96G46 650 aaKnown RBP7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SPATA17Q96L03 361 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 LRGUKQ96M69 825 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CEP295NLQ96MC4 621 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 OLFM1Q99784 485 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CENPKQ9BS16 269 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SOX7Q9BT81 388 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 SLC25A23Q9BV35 468 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 GTSE1Q9NYZ3 720 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 CNOT11Q9UKZ1 510 aaKnown RBP7.78□□□□□ -1.16
CXCR4-201ENST00000241393 RAB26Q9ULW5 256 aa7.78□□□□□ -1.16
CXCR4-201ENST00000241393 MYO16Q9Y6X6 1858 aa7.77□□□□□ -1.16
CXCR4-201ENST00000241393 DOCK4Q8N1I0 1966 aa7.77□□□□□ -1.16
CXCR4-201ENST00000241393 BBIP1A8MTZ0 92 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 J3KR12 359 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 FFAR3O14843 346 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 UBDO15205 165 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 LDB2O43679 373 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 PRAMEF11O60813 436 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 RNASEH1O60930 286 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 SORBS2O94875 1100 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 GASTP01350 101 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 JUNP05412 331 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 FGF4P08620 206 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 ATXN1LP0C7T5 689 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 UBTFL6P0CB48 400 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 GAAP10253 952 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 HAPLN1P10915 354 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 ENO3P13929 434 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 XRCC1P18887 633 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 FDXRP22570 491 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 PSMA3P25788 255 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 YWHAQP27348 245 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 CSF2RBP32927 897 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 AQP4P55087 323 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 CD69Q07108 199 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 SLC10A7Q0GE19 358 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 CRHR2Q13324 411 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 CEACAM7Q14002 265 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 GRAMD1BQ3KR37 738 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 C5orf22Q49AR2 442 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 SIRPB2Q5JXA9 342 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 AGBL4Q5VU57 503 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 LPCAT4Q643R3 524 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM198Q66K66 360 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 USP30Q70CQ3 517 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 BCL6BQ8N143 479 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 GALNT15Q8N3T1 639 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 RHEBL1Q8TAI7 183 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF480Q8WV37 535 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 SNX33Q8WV41 574 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 CYP2S1Q96SQ9 504 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 CDK5RAP1Q96SZ6 601 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 SPATA25Q9BR10 227 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 POLR1EQ9GZS1 481 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 GSTO2Q9H4Y5 243 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 TLR8Q9NR97 1041 aaKnown RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 PLK2Q9NYY3 685 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 UXTQ9UBK9 157 aaPredicted RBP7.77□□□□□ -1.17
CXCR4-201ENST00000241393 RIMS3Q9UJD0 308 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 TUBD1Q9UJT1 453 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 MYLKQ15746 1914 aa7.77□□□□□ -1.17
CXCR4-201ENST00000241393 SMIM31A0A1B0GVY4 71 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 EIF4E1BA6NMX2 242 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 PSMD12O00232 456 aaPredicted RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CA12O43570 354 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 GPC4O75487 556 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 RPP40O75818 363 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 GLP2RO95838 553 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 POU2F2P09086 479 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 OR4Q2P0C623 313 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ZDHHC11BP0C7U3 371 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CALRP27797 417 aaKnown RBP7.76□□□□□ -1.17
CXCR4-201ENST00000241393 CTGFP29279 349 aa7.76□□□□□ -1.17
CXCR4-201ENST00000241393 ERFP50548 548 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms