RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 IRF8Q02556 426 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TIGD6Q17RP2 521 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TIGD3Q6B0B8 471 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 SLC25A25Q6KCM7 469 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 NPNTQ6UXI9 565 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 CYP2U1Q7Z449 544 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TDRPQ86YL5 185 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 NMUR2Q9GZQ4 415 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 POLR1EQ9GZS1 481 aaKnown RBP10.93□□□□□ -0.66
MSH6-201ENST00000234420 RAP2CQ9Y3L5 183 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 NUAK1O60285 661 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 NPPAP01160 153 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 CD53P19397 219 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 SSR2P43308 183 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 DPYSL3Q14195 570 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TPRG1LQ5T0D9 272 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 GPR180Q86V85 440 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 MARVELD2Q8N4S9 558 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 UFD1Q92890 307 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TTYH2Q9BSA4 534 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 TAS2R1Q9NYW7 299 aa10.93□□□□□ -0.66
MSH6-201ENST00000234420 FBP2O00757 339 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CLDN4O14493 209 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ACOX3O15254 700 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZNF254O75437 659 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 MLYCDO95822 493 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 RPL22P35268 128 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 SNU13P55769 128 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 WDR45BQ5MNZ6 344 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 KCTD9Q7L273 389 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CLNKQ7Z7G1 428 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZNF598Q86UK7 904 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 RASGEF1CQ8N431 466 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZNF570Q96NI8 536 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SEC14L4Q9UDX3 406 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 A0A0G2JN53 185 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 OR6C6A6NF89 314 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 TNFRSF10BO14763 440 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SGCEO43556 437 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 PRKCGP05129 697 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 KLK3P07288 261 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 PTPRAP18433 802 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 YAP1P46937 504 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 PLEKHG6Q3KR16 790 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 TIGD2Q4W5G0 525 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 GRHL2Q6ISB3 625 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 XKR5Q6UX68 686 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 UNC5AQ6ZN44 842 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 FRS2Q8WU20 508 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 EXOSC8Q96B26 276 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 CPNE2Q96FN4 548 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZNF518BQ9C0D4 1074 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 LIN28AQ9H9Z2 209 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 ERVK-19Q9WJR5 959 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 POLR3HQ9Y535 204 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 MYOCOSA0A1B0GUC4 107 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 A0A1W2PQH9 124 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 TNFRSF11BO00300 401 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 LGALS2P05162 132 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 GZMAP12544 262 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CPN2P22792 545 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 MAGEA3P43357 314 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 NKX2-5P52952 324 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 RCAN1P53805 252 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 STAG3L4Q8TBR4 150 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SLC7A6OSQ96CW6 309 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 ACSS2Q9NR19 701 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 PLEKHA6Q9Y2H5 1048 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 A0A1B0GVC2 190 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SLC22A3O75751 556 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 PUM1Q14671 1186 aaKnown RBP eCLIP10.92□□□□□ -0.666e-7■■■□□ 16.1
MSH6-201ENST00000234420 PRKD1Q15139 912 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 NKAPLQ5M9Q1 402 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZNF574Q6ZN55 896 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 TXNRD3Q86VQ6 643 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 DEFB106AQ8N104 65 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 LZTR1Q8N653 840 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 C12orf29Q8N999 325 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CNDP2Q96KP4 475 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 PPP3R2Q96LZ3 170 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 WDR55Q9H6Y2 383 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 CD93Q9NPY3 652 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 EIF2B3Q9NR50 452 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 MAN2B2Q9Y2E5 1009 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 PCDHGA11Q9Y5H2 935 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CLCA3PQ9Y6N3 262 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 DNM1LO00429 736 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CABYRO75952 493 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CYP11B2P19099 503 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 RAB3BP20337 219 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 RBMS1P29558 406 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 CORO1AP31146 461 aaKnown RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 ZNF135P52742 658 aaPredicted RBP10.92□□□□□ -0.66
MSH6-201ENST00000234420 ACTR3P61158 418 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 SYT16Q17RD7 645 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 CARD17Q5XLA6 110 aa10.92□□□□□ -0.66
MSH6-201ENST00000234420 FAM83HQ6ZRV2 1179 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms