RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CTRCQ99895 268 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 HGH1Q9BTY7 390 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 INTS10Q9NVR2 710 aaKnown RBP13.32□□□□□ -0.28
VEGFA-201ENST00000230480 SAMD15Q9P1V8 674 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 GNPTGQ9UJJ9 305 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 POMT2Q9UKY4 750 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 CCDC88CQ9P219 2028 aa13.32□□□□□ -0.28
VEGFA-201ENST00000230480 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 CXorf49A8MYA2 514 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 SMAPO00193 183 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 TOX3O15405 576 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 TIAF1O95411 115 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 CTSBP07858 339 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 NELFEP18615 380 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 PRDX3P30048 256 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 ECHS1P30084 290 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 GABRA4P48169 554 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 CARSP49589 748 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 SEPHS1P49903 392 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 MAPK10P53779 464 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 CDKN2DP55273 166 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 YBX1P67809 324 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 TLE3Q04726 772 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 ZXDCQ2QGD7 858 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 DNAJC21Q5F1R6 531 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 PLEKHS1Q5SXH7 462 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 IRGCQ6NXR0 463 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 C19orf48Q6RUI8 117 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 SDCCAG8Q86SQ7 713 aaPredicted RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 TBC1D21Q8IYX1 336 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 PDIK1LQ8N165 341 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 SIDT2Q8NBJ9 832 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 CD200R1Q8TD46 325 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 HNRNPLLQ8WVV9 542 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 ASZ1Q8WWH4 475 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 DLG3Q92796 817 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 LRRC39Q96DD0 335 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 OR2A14Q96R47 310 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 TAAR9Q96RI9 348 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 TTC1Q99614 292 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 AARSD1Q9BTE6 412 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 PITPNM3Q9BZ71 974 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 B3GNT4Q9C0J1 378 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 FBXO8Q9NRD0 319 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 ZC3H7BQ9UGR2 993 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 IKZF3Q9UKT9 509 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 ASF1AQ9Y294 204 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 COLEC10Q9Y6Z7 277 aa13.31□□□□□ -0.28
VEGFA-201ENST00000230480 MDC1Q14676 2089 aaKnown RBP13.31□□□□□ -0.28
VEGFA-201ENST00000230480 A0A1W2PPV9 198 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 H3BMH7 237 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 ZW10O43264 779 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 C1orf105O95561 183 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 TTC4O95801 387 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 TSPAN12O95859 305 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 PVRP15151 417 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 ST6GAL1P15907 406 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 PAMP19021 973 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 NDUFS1P28331 727 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 RBMS1P29558 406 aaKnown RBP13.3□□□□□ -0.28
VEGFA-201ENST00000230480 PKLRP30613 574 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 SSTR1P30872 391 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 BDKRB1P46663 353 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 ARL4CP56559 192 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 PLOD1Q02809 727 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-201ENST00000230480 WHAMMP3Q1A5X7 153 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.3□□□□□ -0.28
VEGFA-201ENST00000230480 RNF187Q5TA31 235 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-201ENST00000230480 CACHD1Q5VU97 1274 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 TMEM207Q6UWW9 146 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 AMIGO1Q86WK6 493 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 FAM20CQ8IXL6 584 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 LMNTD2Q8IXW0 634 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 LCN9Q8WX39 176 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 CFAP36Q96G28 342 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 NAF1Q96HR8 494 aaKnown RBP13.3□□□□□ -0.28
VEGFA-201ENST00000230480 NDNQ99608 321 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 GPR21Q99679 349 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 AKIRIN1Q9H9L7 192 aaPredicted RBP13.3□□□□□ -0.28
VEGFA-201ENST00000230480 FAM60AQ9NP50 221 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 DHRS7Q9Y394 339 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 HEBP2Q9Y5Z4 205 aa13.3□□□□□ -0.28
VEGFA-201ENST00000230480 TEX51A0A1B0GUA7 166 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 SLC9B1P1A6NJY1 282 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 ARHGEF33A8MVX0 844 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 KIF2AO00139 706 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 IFRD1O00458 451 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 WISP3O95389 354 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 APOA4P06727 396 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 JMJD7P0C870 316 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 CSTF2P33240 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 PPARGP37231 505 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 CUL1Q13616 776 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 THOC5Q13769 683 aaKnown RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 COL28A1Q2UY09 1125 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms