RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SERTM1A2A2V5 107 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 FAM220BPB1ANY3 271 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 CKMP06732 381 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 CHRM1P11229 460 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 SRCP12931 536 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 ACPPP15309 386 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 GABRR2P28476 465 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 MAPK1P28482 360 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 SOX11P35716 441 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 RPIAP49247 311 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 HNMTP50135 292 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 HLCSP50747 726 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 CLDN8P56748 225 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 NUP107P57740 925 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 HMGCS1Q01581 520 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 GBX1Q14549 363 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 ARHGAP22Q7Z5H3 698 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 TSPAN33Q86UF1 283 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC22A17Q8WUG5 538 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 BHMTQ93088 406 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 AURKBQ96GD4 344 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 ZNF641Q96N77 438 aaPredicted RBP21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 TUBA1CQ9BQE3 449 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 SLC12A9Q9BXP2 914 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 CEP44Q9C0F1 390 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 KCNH6Q9H252 994 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 ACTR8Q9H981 624 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 FARSBQ9NSD9 589 aaKnown RBP21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 ETAA1Q9NY74 926 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 SNX6Q9UNH7 406 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 HS3ST2Q9Y278 367 aa21.49■■□□□ 1.03
SMARCD2-201ENST00000225742 PLXNB3Q9ULL4 1909 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 TRBV5-3A0A0A0MS03 114 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 SEC24DO94855 1032 aaPredicted RBP21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 RETP07949 1114 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 THRBP10828 461 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 SP140Q13342 867 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 SPANXN4Q5MJ08 99 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 LRIF1Q5T3J3 769 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 LRRC66Q68CR7 880 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 DHRS4L2Q6PKH6 230 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 TBPL2Q6SJ96 375 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 MSANTD1Q6ZTZ1 278 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 MICU2Q8IYU8 434 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 OR52E6Q96RD3 313 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 RMND5AQ9H871 391 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 PARVBQ9HBI1 364 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 ARL15Q9NXU5 204 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 ADGRE2Q9UHX3 823 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 INTS6Q9UL03 887 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 V9GYQ6 96 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 A0A096LPI6 279 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 NUAK1O60285 661 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 ALPLP05186 524 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 BCKDHAP12694 445 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 AOAHP28039 575 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 MTHFRP42898 656 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 NRIP1P48552 1158 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 RPS14P62263 151 aaKnown RBP21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 PYCR3Q53H96 274 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 MSRB3Q8IXL7 192 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 PLPP6Q8IY26 295 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 ADGRG2Q8IZP9 1017 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 OR10A6Q8NH74 314 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 FIG4Q92562 907 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 TOX2Q96NM4 488 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 USE1Q9NZ43 259 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 CLEC4EQ9ULY5 219 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 PDE10AQ9Y233 779 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 TMED5Q9Y3A6 229 aa21.48■■□□□ 1.03
SMARCD2-201ENST00000225742 CXCR6O00574 342 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 KPNA5O15131 536 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 FKTNO75072 461 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 POP4O95707 220 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 MT-ND1P03886 318 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 CYP4F8P98187 520 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 BOP1Q14137 746 aaKnown RBP21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 AAK1Q2M2I8 961 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 SGO1Q5FBB7 561 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 TTC23Q5W5X9 447 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 C22orf39Q6P5X5 142 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 SUSD1Q6UWL2 747 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 UBE2R2Q712K3 238 aaPredicted RBP21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 GAREM2Q75VX8 874 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 CALHM3Q86XJ0 350 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 ZDHHC13Q8IUH4 622 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 CLVS1Q8IUQ0 354 aaPredicted RBP21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 ISOC1Q96CN7 298 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 CMTM7Q96FZ5 175 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 EMILIN2Q9BXX0 1053 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 ZFP14Q9HCL3 533 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 LIMD1Q9UGP4 676 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 CROCCQ5TZA2 2017 aa21.47■■□□□ 1.03
SMARCD2-201ENST00000225742 PIKFYVEQ9Y2I7 2098 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 PABPN1LA6NDY0 278 aaKnown RBP21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 H0Y858 1186 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 TEX28O15482 410 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 HIST1H2AGP0C0S8 130 aaPredicted RBP21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 CDK4P11802 303 aa21.46■■□□□ 1.03
SMARCD2-201ENST00000225742 HIST1H2ADP20671 130 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms