RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ZNF648Q5T619 568 aaPredicted RBP14.31□□□□□ -0.12
CNOT3-201ENST00000221232 CACHD1Q5VU97 1274 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 IRAK1BP1Q5VVH5 260 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 LRRC66Q68CR7 880 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 SULT1C3Q6IMI6 304 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 CRIPAKQ8N1N5 446 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 FRS2Q8WU20 508 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 SLC22A17Q8WUG5 538 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 SELENOMQ8WWX9 145 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 TMEM169Q96HH4 297 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 BBS2Q9BXC9 721 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 HIPK3Q9H422 1215 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 PCDHB14Q9Y5E9 798 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ST14Q9Y5Y6 855 aa14.31□□□□□ -0.12
CNOT3-201ENST00000221232 ANKRD33BA6NCL7 494 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 HOXA2O43364 376 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 MAN1A2O60476 641 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ABLIM3O94929 683 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ALDH1A1P00352 501 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 THRBP10828 461 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 MATN1P21941 496 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 HOXD10P28358 340 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 CCR7P32248 378 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ADARB1P78563 741 aaKnown RBP14.3□□□□□ -0.12
CNOT3-201ENST00000221232 DAG1Q14118 895 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ZXDCQ2QGD7 858 aaPredicted RBP14.3□□□□□ -0.12
CNOT3-201ENST00000221232 POM121L1PQ3SYA9 428 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 CRTC1Q6UUV9 634 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 VRK3Q8IV63 474 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 GOLM1Q8NBJ4 401 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 NETO1Q8TDF5 533 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 THAP11Q96EK4 314 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 SLC47A1Q96FL8 570 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 EBPLQ9BY08 206 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 MUC13Q9H3R2 512 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 PARVBQ9HBI1 364 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 INTS6Q9UL03 887 aaKnown RBP14.3□□□□□ -0.12
CNOT3-201ENST00000221232 VPS4AQ9UN37 437 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 PHF24Q9UPV7 400 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ELOVL7A1L3X0 281 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ARNTLO00327 626 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 CXCR6O00574 342 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 HS6ST1O60243 411 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 DIRAS1O95057 198 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 JAK1P23458 1154 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 PIGAP37287 484 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 AP1S1P61966 158 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 DDX39BQ13838 428 aaKnown RBP14.3□□□□□ -0.12
CNOT3-201ENST00000221232 GALNT5Q7Z7M9 940 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 TMEM179BQ7Z7N9 219 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 BEND7Q8N7W2 519 aaPredicted RBP14.3□□□□□ -0.12
CNOT3-201ENST00000221232 DCAF4L2Q8NA75 395 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 OVCA2Q8WZ82 227 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 DTNBP1Q96EV8 351 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ACPTQ9BZG2 426 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ZDHHC6Q9H6R6 413 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 ABCB8Q9NUT2 735 aa14.3□□□□□ -0.12
CNOT3-201ENST00000221232 H3BMQ9 156 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 GREM1O60565 184 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 SPAM1P38567 509 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 CDKN2CP42773 168 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 EPHB3P54753 998 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 EMP3P54852 163 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 VAC14Q08AM6 782 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 BNIP3Q12983 259 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 SERPINA13PQ6UXR4 307 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 NXPE1Q8N323 547 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 FAM81AQ8TBF8 368 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 PNPT1Q8TCS8 783 aaKnown RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 FOXJ1Q92949 421 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 SDCCAG3Q96C92 435 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 COG8Q96MW5 612 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 TSEN34Q9BSV6 310 aaKnown RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 CD320Q9NPF0 282 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 TIMMDC1Q9NPL8 285 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 SLCO3A1Q9UIG8 710 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 TMCO1Q9UM00 188 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 BACE2Q9Y5Z0 518 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 A0A0J9YVX5 310 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 ZNF821O75541 412 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 WDR47O94967 919 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 SERPINA1P01009 418 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 ALPLP05186 524 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 UGT2B4P06133 528 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 ZNF182P17025 639 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 AGXTP21549 392 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 CD9P21926 228 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 ALDH3A2P51648 485 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 CCNYL2Q5T2Q4 361 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 UBE2R2Q712K3 238 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 PARP8Q8N3A8 854 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 ZNF548Q8NEK5 533 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 APOLD1Q96LR9 279 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 CCDC90BQ9GZT6 254 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 PAIP1Q9H074 479 aaKnown RBP14.29□□□□□ -0.12
CNOT3-201ENST00000221232 ATP13A3Q9H7F0 1226 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 GPRC5BQ9NZH0 403 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 PDE10AQ9Y233 779 aa14.29□□□□□ -0.12
CNOT3-201ENST00000221232 SLC22A14Q9Y267 594 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms