RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 KRT74Q7RTS7 529 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 ZZZ3Q8IYH5 903 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 CPNE9Q8IYJ1 553 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 KDM1BQ8NB78 822 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 SLC35F5Q8WV83 523 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 POF1BQ8WVV4 589 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 TUBA1CQ9BQE3 449 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 MAF1Q9H063 256 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 STYXL1Q9Y6J8 313 aa11.34□□□□□ -0.59
DNMT3B-201ENST00000201963 RP1L1Q8IWN7 2480 aaPredicted RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 OR6C70A6NIJ9 312 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 A8MU76 341 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 M0QX08 132 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PPEF2O14830 753 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC7A4O43246 635 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 NR2F6P10588 404 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 BMP2P12643 396 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 FOSL2P15408 326 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 DDX5P17844 614 aaKnown RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TYMPP19971 482 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 GRB7Q14451 532 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 STARD3Q14849 445 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 SDE2Q6IQ49 451 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 SYCE2Q6PIF2 218 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 USP43Q70EL4 1123 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TAC4Q86UU9 113 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 CHERPQ8IWX8 916 aaKnown RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TRIM48Q8IWZ4 208 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM86AQ8N2M4 240 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 GPR156Q8NFN8 814 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 CNIH3Q8TBE1 160 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PIK3R3Q92569 461 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM209Q96SK2 561 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 NPLQ9BXD5 320 aaPredicted RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 LHPPQ9H008 270 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC25A51Q9H1U9 297 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 MALT1Q9UDY8 824 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 A0A0U1RQF3 1178 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 OR10H3O60404 316 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PBLDP30039 288 aaPredicted RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 MAP2K4P45985 399 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 LHX8Q68G74 356 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 NANOGP8Q6NSW7 305 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 CYS1Q717R9 158 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 HDAC2Q92769 488 aaKnown RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 RAD9AQ99638 391 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 NANOGQ9H9S0 305 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 MRPL39Q9NYK5 338 aaKnown RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 ERVK-11Q9UQG0 969 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 NME4O00746 187 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 MYOGP15173 224 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 ATF4P18848 351 aaPredicted RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PROZP22891 400 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 HPCAL1P37235 193 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PTPN5P54829 565 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PITX1P78337 314 aaPredicted RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 HMGCS1Q01581 520 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 C11orf88Q6PI97 169 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 CYP20A1Q6UW02 462 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF517Q6ZMY9 492 aaPredicted RBP11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 HFE2Q6ZVN8 426 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 FGD2Q7Z6J4 655 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 LRRC20Q8TCA0 184 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 MZB1Q8WU39 189 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC9A7Q96T83 725 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 FBXO44Q9H4M3 255 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 FBXW11Q9UKB1 542 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 RAB23Q9ULC3 237 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF510Q9Y2H8 683 aa11.33□□□□□ -0.6
DNMT3B-201ENST00000201963 A0A1B0GTW7 788 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TNFRSF11BO00300 401 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TSPAN4O14817 238 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CASKO14936 926 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 DAOAP59103 153 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 SHHQ15465 462 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 ANKS3Q6ZW76 656 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 ZNF280BQ86YH2 543 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CEP97Q8IW35 865 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 COLGALT2Q8IYK4 626 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 LIX1Q8N485 282 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 ASCC1Q8N9N2 400 aaKnown RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM246Q9BRR3 403 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TM6SF2Q9BZW4 377 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CIPCQ9C0C6 399 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 SLC39A8Q9C0K1 460 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 SNX7Q9UNH6 387 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TLR5O60602 858 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 NR4A2P43354 598 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 RAB25P57735 213 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 STEAP4Q687X5 459 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 CCBE1Q6UXH8 406 aaPredicted RBP11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TMEM135Q86UB9 458 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 TP53INP2Q8IXH6 220 aa11.32□□□□□ -0.6
DNMT3B-201ENST00000201963 BTN2A2Q8WVV5 523 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms