RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 HadhaQ8BMS1 763 aaKnown RBP13.18□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Acsm2Q8K0L3 575 aa13.18□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ankra2Q99PE2 312 aa13.18□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ttc25Q9D4B2 624 aa13.18□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Bag6Q9Z1R2 1154 aaKnown RBP13.18□□□□□ -0.3
Rnf4-204ENSMUST00000182047 RgrQ9Z2B3 291 aa13.18□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Fam209A2APA5 170 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Phf11bB4XVQ1 276 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn2r73D3Z7M3 851 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn2r57L7N269 863 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Il4i1O09046 630 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ech1O35459 327 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Socs5O54928 536 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Dbx1P52950 335 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Naa20P61600 178 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pip5k1bP70181 539 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 TigitP86176 249 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hddc2Q3SXD3 199 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ei24Q61070 340 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hfe2Q7TQ32 420 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ugt2a1Q80X89 528 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tmem72Q8C3K5 275 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn1r205Q8R276 316 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Mtg1Q8R2R6 326 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Isoc1Q91V64 297 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 NplQ9DCJ9 320 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Kcne5Q9QZ26 143 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Nlgn4lB0F2B4 945 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Sult3a1O35403 293 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Rhox6O70238 227 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Dsc3P55850 896 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 ThrspQ62264 150 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Elp6Q8BK75 266 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tmem252Q8C353 183 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Grsf1Q8C5Q4 479 aaKnown RBP13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vps50Q8CI71 964 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 ApofQ91V80 315 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Nuf2Q99P69 463 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 PudpQ9D5U5 234 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Idh3aQ9D6R2 366 aaKnown RBP13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tnfsf13Q9D777 241 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Krt6bQ9Z331 562 aa13.17□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr671A0A1B0GSN5 317 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 1810010D01RikA0A1L1SR87 51 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tmem245B1AZA5 876 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm3526E9PZM0 191 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm2888K7N746 267 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Rundc3aO08576 446 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 ClockO08785 855 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Akt1P31750 480 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vps26aP40336 327 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 AdslP54822 484 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 CamkvQ3UHL1 512 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Zfp438Q8BFX2 798 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tmem184bQ8BG09 407 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 HnrnplQ8R081 586 aaKnown RBP13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn1r214Q8R279 367 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr96Q8VFE3 313 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Rgs3Q9DC04 966 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vps35Q9EQH3 796 aaKnown RBP13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Tor1bQ9ER41 336 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vps13aQ5H8C4 3166 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm14459A2BI73 179 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm6614M0QWR8 670 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Kcnn4O89109 425 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 GsnP13020 780 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Kcnj9P48543 393 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Faf1P54731 649 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ermp1Q3UVK0 898 aaKnown RBP13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Cep295nlQ497N6 533 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 MslnQ61468 625 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Map2k2Q63932 401 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ablim3Q69ZX8 682 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Sox11Q7M6Y2 395 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Znf451Q8C0P7 1056 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Mettl3Q8C3P7 580 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Smap1Q91VZ6 440 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc5a2Q923I7 670 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 HnrnpabQ99020 285 aaKnown RBP13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Csnk1dQ9DC28 415 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 PtsQ9R1Z7 144 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Nme4Q9WV84 186 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn2r118E9Q1C1 853 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm17175E9Q528 179 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm597E9Q8J5 896 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ctnnd2O35927 1247 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Psmb10O35955 273 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Clec2lP0C7M9 211 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ddx6P54823 483 aaKnown RBP13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 AnpepP97449 966 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hk3Q3TRM8 922 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc35e2Q8C811 405 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Trpv3Q8K424 791 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ppp1r8Q8R3G1 351 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Dhcr24Q8VCH6 516 aaKnown RBP13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Lgals12Q91VD1 314 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pcdhgc3Q91XX1 934 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Mapk8Q91Y86 384 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Macrod1Q922B1 323 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Sugt1Q9CX34 336 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms