RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Atf4Q06507 349 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Sema5bQ60519 1093 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Imp3Q921Y2 184 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 NenfQ9CQ45 171 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tex47Q9D5W8 253 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Usp12Q9D9M2 370 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dgat2Q9DCV3 388 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Brd7O88665 651 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nr4a1P12813 601 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 UoxP25688 303 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ppm1bP36993 390 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Atp5jP97450 108 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Xlr4cQ3TKR2 215 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1313Q7TQW8 311 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ces2aQ8QZR3 558 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Eml3Q8VC03 897 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dppa5aQ9CQS7 118 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Xlr4bQ9JJQ7 215 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Aldh3b3J3QMK6 479 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cyp2a4P15392 494 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Coq10bQ3THF9 240 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pacs2Q3V3Q7 862 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rasgrp3Q6NZH9 691 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ccdc126Q8BIS8 140 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Atat1Q8K341 421 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Stoml2Q99JB2 353 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nt5cQ9JM14 200 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Dhtkd1A2ATU0 921 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 MaptP10637 733 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tnfsf9P41274 309 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rps17P63276 135 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ap5b1Q3TAP4 876 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 FaddQ61160 205 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Wfikkn2Q7TQN3 571 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Kcng4Q80XM3 506 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cars2Q8BYM8 551 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Nmur2Q8BZ39 395 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ugt2b1Q8R084 529 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr683Q8VGV1 319 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cntnap4Q99P47 1310 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm45208A0A140LJ36 292 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 TgfbiP82198 683 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tcf7l2Q924A0 459 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Fam122cQ9D5J5 180 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tlr4Q9QUK6 835 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mroh5E9PUJ8 762 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r34E9PVI0 852 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r41E9Q5C7 852 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r40F6W043 852 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r37F8VQD3 802 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 S100a2J3QMC7 104 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r36K7N741 852 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Got2P05202 430 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Apoa2P09813 102 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Serpine1P22777 402 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem209Q8BRG8 561 aaKnown RBP11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Akr1c18Q8K023 323 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc15a2Q9ES07 729 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ggt5Q9Z2A9 573 aa11.76□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pabpc4lG5E8X2 370 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mpzl2O70255 215 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc2a7P0C6A1 513 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 UtyP79457 1212 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ddx51Q6P9R1 639 aaKnown RBP11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc9a4Q8BUE1 797 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Bend5Q8C6D4 421 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Q8CDN1 933 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Mul1Q8VCM5 352 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr45Q8VGM1 311 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Ufsp2Q99K23 461 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Otub2Q9CQX0 234 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Orc5Q9WUV0 435 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm6502L7N456 481 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Psmb10O35955 273 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clk1P22518 483 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Clcn4Q61418 747 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1418Q7TQS3 318 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Prdm4Q80V63 803 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Slc9a9Q8BZ00 644 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Grsf1Q8C5Q4 479 aaKnown RBP11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Uroc1Q8VC12 676 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Atad1Q9D5T0 361 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Lipo4D3Z608 396 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Vmn2r56E9Q4U5 779 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 MutP16332 748 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Adamts15P59384 950 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Polr2mQ6P6I6 366 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tas2r106Q7M724 308 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Zfp940Q8R2Q3 566 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Rasgef1cQ9D300 466 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Pex14Q9R0A0 376 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr1508Q9R0K4 310 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cldn9Q9Z0S7 217 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 5430401F13RikE9Q328 175 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Gm6619F6URP1 175 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Olfr603L7N1Y4 312 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Psme2P97372 239 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tmem199Q5SYH2 208 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Cyp20a1Q8BKE6 462 aa11.75□□□□□ -0.53
Trim56-201ENSMUST00000054384 Tfb1mQ8JZM0 345 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms