RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Kcnj8P97794 424 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 LvrnQ2KHK3 559 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dmrtc1bQ2PMX6 267 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mapkapk3Q3UMW7 384 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Clca4bQ3UW98 925 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mapre1Q61166 268 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Colgalt2Q6NVG7 625 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp2c54Q6XVG2 490 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn2r81Q80Z09 865 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Serpina3bQ8BYY9 420 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tbl3Q8C4J7 801 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Lsm14aQ8K2F8 462 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 RorbQ8R1B8 470 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr677Q8VF06 312 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr441Q8VFS5 310 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Oas1hQ8VI97 369 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Msh4Q99MT2 958 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dppa5aQ9CQS7 118 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 D10Jhu81eQ9D172 266 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 MispQ9D279 648 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ubqln5Q9D4I8 510 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dap3Q9ER88 391 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nufip1Q9QXX8 484 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rgs20Q9QZB1 239 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fbxo17Q9QZM8 286 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Epb41l1Q9Z2H5 879 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr566A0A1B0GST0 319 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1215A3KGY3 312 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gbp11A9YVJ5 442 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vsig10lD3YZF7 868 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn2r125D3Z3M1 369 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cyp2j8G3UZ38 503 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ech1O35459 327 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hes2O54792 157 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Bard1O70445 765 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 MndaP0DOV1 425 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pabpc1P29341 636 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mbl1P39039 239 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Gpat2Q14DK4 801 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 IspdQ5RJG7 447 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Myo1dQ5SYD0 1006 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc6a4Q60857 630 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sec24dQ6NXL1 1032 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Trim17Q7TPM3 477 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 MtdhQ80WJ7 579 aaKnown RBP13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Fam78aQ8C552 283 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Acsl5Q8JZR0 683 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Treml1Q8K558 317 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Trim16Q99PP9 556 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Themis3Q9CU24 569 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tex47Q9D5W8 253 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 PikfyveQ9Z1T6 2097 aa13.18□□□□□ -0.3
Nup88-201ENSMUST00000035283 MntO08789 591 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 P01810 119 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 F2P19221 618 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Bmp6P20722 510 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hdgfl2Q3UMU9 669 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Prss36Q5K2P8 849 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 UrgcpQ5NCI0 926 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Hesx1Q61658 185 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Cox8aQ64445 69 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Lix1Q6P566 282 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Bhlhb9Q6PB60 539 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 BpifcQ8C186 509 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Arel1Q8CHG5 823 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Vmn1r191Q8K4D0 298 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc29a4Q8R139 528 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Man2c1Q91W89 1039 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Sesn3Q9CYP7 492 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 GrifinQ9D1U0 144 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Kbtbd12Q9D618 625 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Phf10Q9D8M7 497 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ptges3lQ9D9A7 131 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Prokr1Q9JKL1 393 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Znhit2Q9QY66 399 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 1700001O22RikA2APZ1 375 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 4930402K13RikB1AW18 415 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 TagapB2RWW0 714 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Itgb1P09055 798 aaKnown RBP13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 CcnoP0C242 352 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Scg5P12961 212 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Ifngr1P15261 477 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Acvr2aP27038 513 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tacr2P30549 384 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 IdsQ08890 552 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Krt80Q0VBK2 452 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Slc16a10Q3U9N9 512 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pcgf5Q3UK78 256 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pik3c3Q6PF93 887 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Tas2r131Q7M708 310 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1085Q7TR64 313 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Nrde2Q80XC6 1172 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rap2aQ80ZJ1 183 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Clec1aQ8BWY2 269 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 CenpiQ8K1K4 746 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Olfr1047Q8VGS0 319 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Mob2Q8VI63 235 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Dpy30Q99LT0 99 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Rfc5Q9D0F6 339 aa13.17□□□□□ -0.3
Nup88-201ENSMUST00000035283 Pus10Q9D3U0 527 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms