RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Tp73Q9JJP2 631 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 DguokQ9QX60 277 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Zbp1Q9QY24 411 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Clic1Q9Z1Q5 241 aaKnown RBP12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Epb41l1Q9Z2H5 879 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tmem215A7E1Z1 235 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ces2hF6Z9B9 558 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 MlxO08609 298 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Serpina3cP29621 417 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 EpycP70186 322 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 NficP70255 439 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Galnt3P70419 633 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mmp11Q02853 492 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Myadml2Q08AU7 307 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Crhr2Q60748 411 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pfkfb4Q6DTY7 469 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Olfr1197Q7TR13 314 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Olfr1196Q7TR14 314 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Galnt7Q80VA0 657 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Wipi2Q80W47 445 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 MtdhQ80WJ7 579 aaKnown RBP12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Dtd2Q8BHA3 168 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Psd4Q8BLR5 1005 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ikzf5Q8BU00 419 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mrgpra2Q91WW4 305 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ggt7Q99JP7 662 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rsl24d1Q99L28 163 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rcan2Q9JHG2 197 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 CtsjQ9R014 334 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 KcpQ3U492 1550 aa12.45□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm30302A0A1Y7VN40 1110 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Nipsnap3aB1AWZ3 247 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm4871D3Z0W7 314 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm13128L7MU96 475 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 NapsaO09043 419 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Sult2b1O35400 338 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Grk4O70291 574 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 GzmcP08882 248 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 C2P21180 760 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ptpn5P54830 541 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Lpcat1Q3TFD2 534 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pfdn4Q3UWL8 134 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Il15raQ60819 263 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cyp4b1Q64462 511 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Nqo1Q64669 274 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 C1qtnf6Q6IR41 264 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Colgalt2Q6NVG7 625 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm6377Q8BHV4 303 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Arel1Q8CHG5 823 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn1r84Q8R284 318 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mcoln3Q8R4F0 553 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Wdr74Q8VCG3 384 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Shmt2Q9CZN7 504 aaKnown RBP12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ribc2Q9D4Q1 309 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rpn2Q9DBG6 631 aaKnown RBP12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Slco1c1Q9ERB5 715 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Slc13a2Q9ES88 586 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Igkv18-36A0A075B5M9 114 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm13101A2ASJ0 481 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Aldoart2A6ZI47 364 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm10718D3Z1I7 227 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Zfp169E9Q3R6 731 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn2r38G3UYA8 861 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm16427J3QN52 483 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn2r33K7N705 861 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 ClockO08785 855 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Hoxa4P06798 285 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Patl1Q3TC46 770 aaKnown RBP12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Usp39Q3TIX9 564 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Parp3Q3ULW8 533 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cep295nlQ497N6 533 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rnf215Q5SPX3 379 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tas2r131Q7M708 310 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 AftphQ80WT5 931 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Susd6Q8BGE4 302 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Fignl1Q8BPY9 683 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 MmaaQ8C7H1 415 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 HscbQ8K3A0 234 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Eif3lQ8QZY1 564 aaKnown RBP12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mettl22Q8R1C6 393 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ptgr1Q91YR9 329 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cd209eQ91ZW7 208 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Dpy30Q99LT0 99 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Lyrm1Q9CQB7 122 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Olig2Q9EQW6 323 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 SqorQ9R112 450 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ttll2A4Q9E4 540 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 FanceB8JJD6 213 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Lipo4D3Z608 396 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Speer4cG3UXD1 256 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn2r54K7N649 806 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm10354K7N6A0 256 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn2r112L7N221 857 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pdlim1O70400 327 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gnpda1O88958 289 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Itgb7P26011 806 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Dsc3P55850 896 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Kcnab3P97382 249 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cog7Q3UM29 770 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mapkapk3Q3UMW7 384 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms