RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 IL27RAQ6UWB1 636 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 TAX1BP1Q86VP1 789 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 MCOLN3Q8TDD5 553 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 DLG3Q92796 817 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 FERD3LQ96RJ6 166 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 INSM2Q96T92 566 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-230ENST00000641927 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 GTPBP2Q9BX10 602 aaKnown RBP17.05■□□□□ 0.32
PHGDH-230ENST00000641927 SLC12A9Q9BXP2 914 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 GAREM1Q9H706 876 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 CNOT10Q9H9A5 744 aaKnown RBP17.05■□□□□ 0.32
PHGDH-230ENST00000641927 PARVBQ9HBI1 364 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 UCKL1Q9NWZ5 548 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 CD274Q9NZQ7 290 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 SCHIP1Q9P0W5 487 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-230ENST00000641927 CIDEBQ9UHD4 219 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 CUL9Q8IWT3 2517 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 DMDP11532 3685 aa17.05■□□□□ 0.32
PHGDH-230ENST00000641927 PI4KAP42356 2102 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 B4DGG1 531 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 GFYI3L273 518 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 UBXN8O00124 270 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ARHGAP33O14559 1287 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 KHNYNO15037 678 aaKnown RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 SLC16A5O15375 505 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 YY2O15391 372 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 SMIM24O75264 130 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 PSIP1O75475 530 aaKnown RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 S100BP04271 92 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ANXA6P08133 673 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 MYL2P10916 166 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TAC1P20366 129 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 RPIAP49247 311 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 BNIP3Q12983 259 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ABRAXAS1Q6UWZ7 409 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 UNC5DQ6UXZ4 953 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 OR5AR1Q8NGP9 310 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ATOH8Q96SQ7 321 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 EGFL8Q99944 293 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TRIT1Q9H3H1 467 aaKnown RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 MID2Q9UJV3 735 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 PDE10AQ9Y233 779 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TDRKHQ9Y2W6 561 aaKnown RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 OARD1Q9Y530 152 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ZFC3H1O60293 1989 aaKnown RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TMEM131Q92545 1883 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 FRYLO94915 3013 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 WDR91A4D1P6 747 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ARHGEF33A8MVX0 844 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 FFAR2O15552 330 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 C1orf105O95561 183 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 RPN2P04844 631 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 SBK3P0C264 359 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 GFAPP14136 432 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 CPA3P15088 417 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ETV4P43268 484 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 PRKG2Q13237 762 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TGFBIQ15582 683 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 RPE65Q16518 533 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 PPP1R3AQ16821 1122 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ZNF423Q2M1K9 1284 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 DEFB133Q30KQ1 61 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TCEAL6Q6IPX3 200 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 WASH2PQ6VEQ5 465 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TMEM151AQ8N4L1 468 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 MAGEC3Q8TD91 643 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 DENND1AQ8TEH3 1009 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ZDHHC1Q8WTX9 485 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 DYDC1Q8WWB3 177 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 TCEAL3Q969E4 200 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 CXorf40BQ96DE9 158 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 IRF2BPLQ9H1B7 796 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 IL21RQ9HBE5 538 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 WASH6PQ9NQA3 447 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
PHGDH-230ENST00000641927 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 ARL15Q9NXU5 204 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 FAM53CQ9NYF3 392 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 COPG2Q9UBF2 871 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 PCOLCE2Q9UKZ9 415 aa17.04■□□□□ 0.32
PHGDH-230ENST00000641927 A0A1B0GTQ1 180 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 CCDC189A1A4V9 331 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 KRT87PA6NCN2 255 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 A6NCN8 305 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 NEMP2A6NFY4 417 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 LMO7DNF2Z398 122 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 POLR3GO15318 223 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-230ENST00000641927 CER1O95813 267 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-230ENST00000641927 TPBGLP0DKB5 382 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 MTHFD1P11586 935 aaKnown RBP17.03■□□□□ 0.32
PHGDH-230ENST00000641927 NEFHP12036 1026 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 SLC2A4P14672 509 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 KCNA4P22459 653 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 RXRGP48443 463 aa17.03■□□□□ 0.32
PHGDH-230ENST00000641927 ATXN3P54252 364 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-230ENST00000641927 WDR4P57081 412 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms