RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 CKAP4Q07065 602 aaKnown RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 DHX9Q08211 1270 aaKnown RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 ILF2Q12905 390 aaKnown RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 CALCOCO2Q13137 446 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 FRG1Q14331 258 aaKnown RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 BRD3Q15059 726 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 HIF1AQ16665 826 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 ZNF470Q6ECI4 717 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 DUS1LQ6P1R4 473 aaKnown RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 KIAA0408Q6ZU52 694 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 CENPUQ71F23 418 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 ZNF572Q7Z3I7 529 aaPredicted RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 OR52E1Q8NGJ3 308 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 OR8K5Q8NH50 307 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 MAGEC3Q8TD91 643 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 C1GALT1Q9NS00 363 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 CDYLQ9Y232 598 aa13.86□□□□□ -0.19
SDHD-209ENST00000640554 KMT2BQ9UMN6 2715 aaPredicted RBP13.86□□□□□ -0.19
SDHD-209ENST00000640554 C2orf74A8MZ97 194 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 E5RI56 91 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 ITGB6P18564 788 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 CCNFP41002 786 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 ATP1A2P50993 1020 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 ITGA8P53708 1063 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 PRKG2Q13237 762 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 CRYMQ14894 314 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 KCTD19Q17RG1 926 aaPredicted RBP13.85□□□□□ -0.19
SDHD-209ENST00000640554 TTLL9Q3SXZ7 439 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 BBS9Q3SYG4 887 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 TMTC4Q5T4D3 741 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 FAM92BQ6ZTR7 304 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 MICALCLQ6ZW33 695 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 GALNT7Q86SF2 657 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 KCNMB4Q86W47 210 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 DTX1Q86Y01 620 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 DCUN1D3Q8IWE4 304 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 SIDT2Q8NBJ9 832 aaKnown RBP13.85□□□□□ -0.19
SDHD-209ENST00000640554 OR5AR1Q8NGP9 310 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 KCNJ9Q92806 393 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 RAB11FIP5Q9BXF6 653 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 PDE7BQ9NP56 450 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 SIDT1Q9NXL6 827 aaKnown RBP13.85□□□□□ -0.19
SDHD-209ENST00000640554 WHRNQ9P202 907 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 CDC23Q9UJX2 597 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 FBXO5Q9UKT4 447 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 POMT2Q9UKY4 750 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 CRYL1Q9Y2S2 319 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
SDHD-209ENST00000640554 B3GALT1Q9Y5Z6 326 aa13.85□□□□□ -0.19
SDHD-209ENST00000640554 IQCF5A8MTL0 148 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 KIF1CO43896 1103 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 MSL3P1P0C860 447 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 POLR2CP19387 275 aaPredicted RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 MAP4P27816 1152 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 ITPKBP27987 946 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 PRDX3P30048 256 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 SKIV2L2P42285 1042 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 SEPHS1P49903 392 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 CAV1Q03135 178 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 CLN3Q13286 438 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 KYNUQ16719 465 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.84□□□□□ -0.19
SDHD-209ENST00000640554 HSP90AA5PQ58FG0 334 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 CTSL3PQ5NE16 218 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 ANKS6Q68DC2 871 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 UGT3A1Q6NUS8 523 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 NEK10Q6ZWH5 1172 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 AGGF1Q8N302 714 aaeCLIP13.84□□□□□ -0.19
SDHD-209ENST00000640554 D2HGDHQ8N465 521 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 RAB42Q8N4Z0 105 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 SNRNP27Q8WVK2 155 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 RAD51AP1Q96B01 352 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 SLC22A18Q96BI1 424 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 NAF1Q96HR8 494 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 CCNL2Q96S94 520 aaPredicted RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 MAP3K3Q99759 626 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 TRIM51Q9BSJ1 452 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 HGH1Q9BTY7 390 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 RAB17Q9H0T7 212 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 FOXJ2Q9P0K8 574 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 ZC3H7BQ9UGR2 993 aaKnown RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 LHX6Q9UPM6 363 aa13.84□□□□□ -0.19
SDHD-209ENST00000640554 TMEM184BQ9Y519 407 aaPredicted RBP13.84□□□□□ -0.19
SDHD-209ENST00000640554 CACNA1BQ00975 2339 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 IGHV5-51A0A0C4DH38 117 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 GSAPA4D1B5 854 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 AGRPO00253 132 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 EIF3FO00303 357 aaPredicted RBP13.83□□□□□ -0.2
SDHD-209ENST00000640554 EIF3HO15372 352 aaKnown RBP eCLIP13.83□□□□□ -0.2
SDHD-209ENST00000640554 FKBP9O95302 570 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 CBSLP0DN79 551 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 FGF5P12034 268 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 CDH3P22223 829 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 CBSP35520 551 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 ELK3P41970 407 aa13.83□□□□□ -0.2
SDHD-209ENST00000640554 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms