RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 C2orf54Q08AI8 447 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 PPM1JQ5JR12 505 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ARHGAP17Q68EM7 881 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 GRHL2Q6ISB3 625 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ITFG1Q8TB96 612 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ZCCHC14Q8WYQ9 949 aaKnown RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 THAP11Q96EK4 314 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 FUT8Q9BYC5 575 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 DYNLRB1Q9NP97 96 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 CACNG4Q9UBN1 327 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MRPS2Q9Y399 296 aaKnown RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 DOCK7Q96N67 2140 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 A0A087X1B8 175 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 KIR2DS5A0A0G2JLQ3 304 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 A0A0G2JNG1 304 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 A0A0X1KG70 313 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TRIM43BA6NCK2 446 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 KIR2DS3K7RE56 304 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 HAX1O00165 279 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 USP12O75317 370 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 CILPO75339 1184 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ALBP02768 609 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TPOP07202 933 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 CD27P26842 260 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 GJA4P35212 333 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 RCVRNP35243 200 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 GP5P40197 560 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SLC26A3P40879 764 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 KIR2DS5Q14953 304 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TLR1Q15399 786 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MED27Q6P2C8 311 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TAC4Q86UU9 113 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SH2D3CQ8N5H7 860 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 HAS1Q92839 578 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TRIM43Q96BQ3 446 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 PTCHD1Q96NR3 888 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 B3GNT5Q9BYG0 378 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 WWP1Q9H0M0 922 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 THAP2Q9H0W7 228 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 POMKQ9H5K3 350 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 GLOD4Q9HC38 313 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF334Q9HCZ1 680 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 LMBRD1Q9NUN5 540 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TELO2Q9Y4R8 837 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 OTCP00480 354 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MPIP34949 423 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 KCNQ1P51787 676 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 PRKAA2P54646 552 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ATP6V0D1P61421 351 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 CBFBQ13951 182 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TIGD6Q17RP2 521 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 C16orf89Q6UX73 402 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 FAM92BQ6ZTR7 304 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 USP49Q70CQ1 688 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 LYSMD3Q7Z3D4 306 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 PIGWQ7Z7B1 504 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 P3H2Q8IVL5 708 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 COX18Q8N8Q8 333 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 HM13Q8TCT9 377 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 PPCDCQ96CD2 204 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 LINGO1Q96FE5 620 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 DDX47Q9H0S4 455 aaKnown RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 DNAJC18Q9H819 358 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SMURF2Q9HAU4 748 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 EQTNQ9NQ60 294 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 GDAP2Q9NXN4 497 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 PTGFRNQ9P2B2 879 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ITGB4P16144 1822 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TRIM64A6NGJ6 449 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ZNF891A8MT65 544 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 C2CD4DB7Z1M9 353 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 HAS3O00219 553 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 CDH16O75309 829 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 RFPL3O75679 317 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TCEA3O75764 348 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 LMO2P25791 158 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MAPK14Q16539 360 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 LEXMQ3ZCV2 418 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MS4A13Q5J8X5 152 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SLC26A9Q7LBE3 791 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM25Q86YD3 366 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 KCT2Q8NC54 265 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ECHDC3Q96DC8 303 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 ERGIC2Q96RQ1 377 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 UTP23Q9BRU9 249 aaKnown RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MCMBPQ9BTE3 642 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SPRTNQ9H040 489 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SLC25A51Q9H1U9 297 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MIOSQ9NXC5 875 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 GLI3P10071 1580 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 OR6C74A6NCV1 312 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 RCCD1A6NED2 376 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 HRH2P25021 359 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MGAT1P26572 445 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SERPINB3P29508 390 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 MTM1Q13496 603 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 SLC29A2Q14542 456 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 DECR1Q16698 335 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TIMM50Q3ZCQ8 353 aa4.93□□□□□ -1.62
SCN1A-218ENST00000640036 TMEM201Q5SNT2 666 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms