RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 SKA2Q8WVK7 121 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-212ENST00000638787 LCN9Q8WX39 176 aa8.63□□□□□ -1.03
NECAP1-212ENST00000638787 CDKL2Q92772 493 aa8.63□□□□□ -1.03
NECAP1-212ENST00000638787 LIN37Q96GY3 246 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-212ENST00000638787 CCDC74BQ96LY2 380 aa8.63□□□□□ -1.03
NECAP1-212ENST00000638787 STRADBQ9C0K7 418 aa8.63□□□□□ -1.03
NECAP1-212ENST00000638787 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
NECAP1-212ENST00000638787 CORO1CQ9ULV4 474 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-212ENST00000638787 NFU1Q9UMS0 254 aa8.63□□□□□ -1.03
NECAP1-212ENST00000638787 DHRS7Q9Y394 339 aa8.63□□□□□ -1.03
NECAP1-212ENST00000638787 MN1Q10571 1320 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-212ENST00000638787 CCDC187A0A096LP49 1063 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 OR6C74A6NCV1 312 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 RRP9O43818 475 aaKnown RBP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 C1QAP02745 245 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 RPN2P04844 631 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 THRAP10827 490 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 STX2P32856 288 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 GFERP55789 205 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 TIAL1Q01085 375 aaKnown RBP eCLIP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 KYNUQ16719 465 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 KLHL35Q6PF15 583 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 ZC3HC1Q86WB0 502 aaKnown RBP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 PLXDC1Q8IUK5 500 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 RELL1Q8IUW5 271 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 GPATCH11Q8N954 259 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 OR52E1Q8NGJ3 308 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 FBF1Q8TES7 1133 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 INPP5DQ92835 1189 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 GATA6Q92908 595 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 NRTNQ99748 197 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 TFB2MQ9H5Q4 396 aaKnown RBP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 TAS2R13Q9NYV9 303 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 NINJ2Q9NZG7 142 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 PDP2Q9P2J9 529 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 KLHL3Q9UH77 587 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 POLG2Q9UHN1 485 aa8.62□□□□□ -1.03
NECAP1-212ENST00000638787 TRMT6Q9UJA5 497 aaKnown RBP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 RUVBL2Q9Y230 463 aaKnown RBP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 TDRKHQ9Y2W6 561 aaKnown RBP8.62□□□□□ -1.03
NECAP1-212ENST00000638787 A0A1W2PNU3 283 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 OR5K3A6NET4 321 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 TRABD2BA6NFA1 517 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 CAPN5O15484 640 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 MCM3P25205 808 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 TRA2AQ13595 282 aaKnown RBP eCLIP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 KLHL38Q2WGJ6 581 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 KBTBD12Q3ZCT8 623 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 C3orf38Q5JPI3 329 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 SNAP47Q5SQN1 464 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 HECTD2Q5U5R9 776 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 FAM45BPQ6NSW5 357 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 UGT3A1Q6NUS8 523 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 IRGCQ6NXR0 463 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 OOSP2Q86WS3 158 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 DCUN1D3Q8IWE4 304 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 CTAGE3PQ8IX95 158 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 RCBTB1Q8NDN9 531 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 OR4E2Q8NGC2 313 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 WDR36Q8NI36 951 aaKnown RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 FAM45AQ8TCE6 357 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 NXPE2Q96DL1 559 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 ELMO2Q96JJ3 720 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 FOPNLQ96NB1 174 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 TGM7Q96PF1 710 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 MCMBPQ9BTE3 642 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 NRSN2Q9GZP1 204 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 RAB33BQ9H082 229 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 CDC42EP4Q9H3Q1 356 aaKnown RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 SRMSQ9H3Y6 488 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 RHOJQ9H4E5 214 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 XKR8Q9H6D3 395 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 HRASLS2Q9NWW9 162 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 EPHA6Q9UF33 1036 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 ICKQ9UPZ9 632 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 NFS1Q9Y697 457 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 PMS2P1A4D2B8 440 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 AGRPO00253 132 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 HGSO14964 777 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 SLU7O95391 586 aaKnown RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 MATN4O95460 622 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 C9P02748 559 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 MPOP05164 745 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 TPBGLP0DKB5 382 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 CBSLP0DN79 551 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 ENO3P13929 434 aaPredicted RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 CD9P21926 228 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 FDXRP22570 491 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 PHBP35232 272 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 CBSP35520 551 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 SKIV2L2P42285 1042 aaKnown RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 BDKRB1P46663 353 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 PPP1CAP62136 330 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 NAB1Q13506 487 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 C16orf72Q14CZ0 275 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 EFTUD2Q15029 972 aaKnown RBP eCLIP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 UBAP2Q5T6F2 1119 aaKnown RBP8.61□□□□□ -1.03
NECAP1-212ENST00000638787 ARMC6Q6NXE6 501 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 NEK10Q6ZWH5 1172 aa8.61□□□□□ -1.03
NECAP1-212ENST00000638787 RAB11FIP2Q7L804 512 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms