RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ZFP14Q9HCL3 533 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 PRRC2BQ5JSZ5 2229 aaKnown RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 H0YJX3 145 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ARNTLO00327 626 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 HNRNPRO43390 633 aaKnown RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 CLDN9O95484 217 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 C8GP07360 202 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 BMP2P12643 396 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 EPORP19235 508 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 VARSP26640 1264 aaKnown RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 NNMTP40261 264 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 GNPDA1P46926 289 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ZXDCQ2QGD7 858 aaPredicted RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 PLA2G4EQ3MJ16 856 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 CDKL4Q5MAI5 379 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ISLR2Q6UXK2 745 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 SPRED2Q7Z698 418 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 RGL4Q8IZJ4 473 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ANKFN1Q8N957 763 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 MTFMTQ96DP5 389 aaKnown RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 PPM1MQ96MI6 270 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 TRAPPC9Q96Q05 1148 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 PIF1Q9H611 641 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ACTR8Q9H981 624 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 PCDH12Q9NPG4 1184 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 SMOXQ9NWM0 555 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 USP22Q9UPT9 525 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 NOTCH4Q99466 2003 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 IFRD1O00458 451 aaPredicted RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 INPP4BO15327 924 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 CTSLP07711 333 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 HIST1H2AGP0C0S8 130 aaPredicted RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 CKMT2P17540 419 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 HIST1H2ADP20671 130 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 GGT5P36269 586 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ETV3P41162 512 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 MAD2L1Q13257 205 aaPredicted RBP21.04■□□□□ 0.96
CLN6-224ENST00000638076 CPSF6Q16630 551 aaKnown RBP eCLIP21.04■□□□□ 0.96
CLN6-224ENST00000638076 CYP51A1Q16850 503 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ADGRG5Q8IZF4 528 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 ASB11Q8WXH4 323 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 USP7Q93009 1102 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 HIST1H2AHQ96KK5 128 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 HIST1H2AJQ99878 128 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 H2AFJQ9BTM1 129 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 FAM192AQ9GZU8 254 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 WBP1LQ9NX94 342 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 MARK1Q9P0L2 795 aa21.04■□□□□ 0.96
CLN6-224ENST00000638076 CHD7Q9P2D1 2997 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 XYLBO75191 536 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 SEC22BO75396 215 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 GRIA2P42262 883 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 PRKCQQ04759 706 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 FPGSQ05932 587 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 SMU1Q2TAY7 513 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 ZBTB49Q6ZSB9 765 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 OTUB2Q96DC9 234 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 LRTM1Q9HBL6 345 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 UPK3BL1B0FP48 263 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 UPK3BL2E5RIL1 263 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 TPST1O60507 370 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 MPC1LP0DKB6 136 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 TIMP2P16035 220 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 CEBPBP17676 345 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 HOXA9P31269 272 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 PLIN5Q00G26 463 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 KIAA0040Q15053 153 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 POM121L1PQ3SYA9 428 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 TMEM240Q5SV17 173 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 PLEKHS1Q5SXH7 462 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 LIX1Q8N485 282 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 LEMD2Q8NC56 503 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 SLC29A3Q9BZD2 475 aa21.03■□□□□ 0.96
CLN6-224ENST00000638076 FAM149AA5PLN7 773 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 SOBPA7XYQ1 873 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 CFAP99D6REC4 459 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 GPIP06744 558 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 HTR1EP28566 365 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 LRRC70Q7Z2Q7 622 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 RALGPS2Q86X27 583 aaPredicted RBP21.02■□□□□ 0.96
CLN6-224ENST00000638076 TCAIMQ8N3R3 496 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 BEND7Q8N7W2 519 aaPredicted RBP21.02■□□□□ 0.96
CLN6-224ENST00000638076 PYCR2Q96C36 320 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 ZBTB18Q99592 522 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 CGREF1Q99674 301 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 SLC2A11Q9BYW1 496 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 AGPAT4Q9NRZ5 378 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 IL36AQ9UHA7 158 aa21.02■□□□□ 0.96
CLN6-224ENST00000638076 TCRBV5S2A0A599 114 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 KRT87PA6NCN2 255 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 PABPN1LA6NDY0 278 aaKnown RBP21.01■□□□□ 0.95
CLN6-224ENST00000638076 KRT6AP02538 564 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 KRT6BP04259 564 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 SYN1P17600 705 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 KRT6CP48668 564 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 DCDC1P59894 354 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 SELPLGQ14242 412 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 AASDHQ4L235 1098 aaPredicted RBP21.01■□□□□ 0.95
CLN6-224ENST00000638076 CACHD1Q5VU97 1274 aa21.01■□□□□ 0.95
CLN6-224ENST00000638076 TTC23LQ6PF05 361 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms