RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 COLEC10Q9Y6Z7 277 aa15.6■□□□□ 0.09
CLN6-216ENST00000636876 TRIM49D1C9J1S8 452 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 WISP3O95389 354 aaPredicted RBP15.59■□□□□ 0.09
CLN6-216ENST00000636876 MATN4O95460 622 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 ALDOAP04075 364 aaKnown RBP15.59■□□□□ 0.09
CLN6-216ENST00000636876 PNLIPP16233 465 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 CRABP2P29373 138 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 ACADVLP49748 655 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 KRT33BQ14525 404 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 NR1D2Q14995 579 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 RASA2Q15283 850 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 PERM1Q5SV97 790 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 LGSNQ5TDP6 509 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 TMEM26Q6ZUK4 368 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 TBC1D21Q8IYX1 336 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 CNPY4Q8N129 248 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 MYO1HQ8N1T3 1032 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 OR5AR1Q8NGP9 310 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 OR5K2Q8NHB8 316 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 CFAP61Q8NHU2 1237 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 IFI44Q8TCB0 444 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 ZFPM2Q8WW38 1151 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 ISL2Q96A47 359 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 PDLIM5Q96HC4 596 aaKnown RBP15.59■□□□□ 0.09
CLN6-216ENST00000636876 FOPNLQ96NB1 174 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 TRIT1Q9H3H1 467 aaKnown RBP15.59■□□□□ 0.09
CLN6-216ENST00000636876 KIR3DX1Q9H7L2 352 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 SYTL2Q9HCH5 934 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 SNX15Q9NRS6 342 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 CHD8Q9HCK8 2581 aa15.59■□□□□ 0.09
CLN6-216ENST00000636876 LILRA5A6NI73 299 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 RPN2P04844 631 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 SLC35E2BP0CK96 405 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 CEACAM1P13688 526 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 MAPK9P45984 424 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 GPR3P46089 330 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 SLCO1A2P46721 670 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 CSRP3P50461 194 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 IFFO1Q0D2I5 559 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 GPR18Q14330 331 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 RAPH1Q70E73 1250 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 ZNF761Q86XN6 746 aaPredicted RBP15.58■□□□□ 0.08
CLN6-216ENST00000636876 RASGRP3Q8IV61 690 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 DCUN1D3Q8IWE4 304 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 EPS8L3Q8TE67 593 aaKnown RBP15.58■□□□□ 0.08
CLN6-216ENST00000636876 ANKRD49Q8WVL7 239 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 ASB11Q8WXH4 323 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 MTBPQ96DY7 904 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 HGH1Q9BTY7 390 aa15.58■□□□□ 0.08
CLN6-216ENST00000636876 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.58■□□□□ 0.08
CLN6-216ENST00000636876 KMT2BQ9UMN6 2715 aaPredicted RBP15.58■□□□□ 0.08
CLN6-216ENST00000636876 IQANK1A0A1B0GTG1 560 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 SMIM23A6NLE4 172 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 GFYI3L273 518 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 RASGRF2O14827 1237 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 CDH16O75309 829 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 PSIP1O75475 530 aaKnown RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 C1orf105O95561 183 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 CATP04040 527 aaKnown RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 C2P06681 752 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 GP1BAP07359 652 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 H2AFXP16104 143 aaPredicted RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 TYK2P29597 1187 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 CCNFP41002 786 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 MAGEA12P43365 314 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 NOVA1P51513 510 aaKnown RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 PRKG2Q13237 762 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 ILKQ13418 452 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 TIFABQ6ZNK6 161 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 SPRED1Q7Z699 444 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 CCDC91Q7Z6B0 441 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 IQCKQ8N0W5 287 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 SLC38A3Q99624 504 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 CCDC3Q9BQI4 270 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 TMEM109Q9BVC6 243 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 ROPN1BQ9BZX4 212 aaPredicted RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 ROPN1Q9HAT0 212 aaPredicted RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 TOR4AQ9NXH8 423 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 EURLQ9NYK6 297 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.57■□□□□ 0.08
CLN6-216ENST00000636876 CTNNAL1Q9UBT7 734 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 TBK1Q9UHD2 729 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 POLG2Q9UHN1 485 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 TLK1Q9UKI8 766 aa15.57■□□□□ 0.08
CLN6-216ENST00000636876 A0A087X1B8 175 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 SPAARA0A1B0GVQ0 90 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 ARHGEF33A8MVX0 844 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 GIPC1O14908 333 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 RFPL3O75679 317 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 C8GP07360 202 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 CCDC166P0CW27 439 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 GMPRP36959 345 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 SLC26A3P40879 764 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 BDKRB1P46663 353 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 EPHA4P54764 986 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 OR1D5P58170 312 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 TAF1BQ53T94 588 aaPredicted RBP15.56■□□□□ 0.08
CLN6-216ENST00000636876 TTC23LQ6PF05 361 aa15.56■□□□□ 0.08
CLN6-216ENST00000636876 RIBC1Q8N443 379 aaPredicted RBP15.56■□□□□ 0.08
CLN6-216ENST00000636876 Q8N9G6 341 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms