RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 RP2O75695 350 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ALDOAP04075 364 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ADH6P28332 368 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CSTF2P33240 577 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GRIA3P42263 894 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ALDH3B1P43353 468 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ENTPD1P49961 510 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NR1H2P55055 460 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ERVK-16P61578 105 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 RHDQ02161 417 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 RPL6Q02878 288 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 DSC3Q14574 896 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ELOA3BQ3SY89 546 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CDONQ4KMG0 1287 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PITRM1Q5JRX3 1037 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FNBP1LQ5T0N5 605 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SLC35F1Q5T1Q4 408 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FIBCD1Q8N539 461 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GALNT11Q8NCW6 608 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ELOA3Q8NG57 546 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CHAC2Q8WUX2 184 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FAM122AQ96E09 287 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SMIM12Q96EX1 92 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GFM1Q96RP9 751 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PCDH9Q9HC56 1237 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 DCP1AQ9NPI6 582 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 POLR3BQ9NW08 1133 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ACTR3BQ9P1U1 418 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NAALADL1Q9UQQ1 740 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FOXN3O00409 490 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ARHGEF15O94989 841 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 IDSP22304 550 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CXCR1P25024 350 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 F2RP25116 425 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MCAMP43121 646 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 HTD2P86397 168 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SLC1A5Q15758 541 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 UGCGQ16739 394 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AAK1Q2M2I8 961 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SBK1Q52WX2 424 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 C6orf183Q5T699 404 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 IL23RQ5VWK5 629 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF574Q6ZN55 896 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TBC1D21Q8IYX1 336 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF610Q8N9Z0 462 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PLA2G15Q8NCC3 412 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CAVIN3Q969G5 261 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SLC38A4Q969I6 547 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 APOPT1Q96IL0 206 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CAMK1GQ96NX5 476 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ORAI3Q9BRQ5 295 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AARSD1Q9BTE6 412 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ATG10Q9H0Y0 220 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SAR1AQ9NR31 198 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SLC39A9Q9NUM3 307 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PNPLA6Q8IY17 1366 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ZFC3H1O60293 1989 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 GJE1A6NN92 205 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NCK2O43639 380 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PRKD3O94806 890 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NFATC1O95644 943 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ALPPP05187 535 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CLEC3BP05452 202 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 UROSP10746 265 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 KCNC1P48547 511 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 RPL14P50914 215 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SYT16Q17RD7 645 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 Q4G0T1 1027 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TRNP1Q6NT89 227 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 XKRXQ6PP77 449 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 FBXO22Q8NEZ5 403 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PROKR2Q8NFJ6 384 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SPATA20Q8TB22 786 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 HTR3CQ8WXA8 447 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 BORCS5Q969J3 196 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CENPNQ96H22 339 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 TMEM176AQ96HP8 235 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 NUDT9Q9BW91 350 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 EIF5A2Q9GZV4 153 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SAV1Q9H4B6 383 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ELAC1Q9H777 363 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PAK1IP1Q9NWT1 392 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ASB6Q9NWX5 421 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ABRACLQ9P1F3 81 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CYP8B1Q9UNU6 501 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ALDOBP05062 364 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 PKMP14618 531 aaKnown RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 THBS2P35442 1172 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 THBS3P49746 956 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ART1P52961 327 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 ATP6V0D1P61421 351 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CD47Q08722 323 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 SCARB2Q14108 478 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 CATSPEREQ5SY80 951 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 N4BP2L1Q5TBK1 243 aaPredicted RBP5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AGAP7PQ5VUJ5 663 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 AGAP6Q5VW22 663 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 DPY19L3Q6ZPD9 716 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 MOB2Q70IA6 237 aa5.93□□□□□ -1.46
SCN1A-212ENST00000636194 WDR53Q7Z5U6 358 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms