RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 CXCL10P02778 98 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 IL6P05231 212 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 EBLN1P0CF75 366 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 CBSLP0DN79 551 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 EPB42P16452 691 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 PCSK2P16519 638 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 BPIP17213 487 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 HOXB6P17509 224 aaKnown RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 NFKBIAP25963 317 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 PCSK6P29122 969 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 CBSP35520 551 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 GNPDA1P46926 289 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 ALDH3A2P51648 485 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 RPS6KA3P51812 740 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 DGKQP52824 942 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 NUP107P57740 925 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 MTPNP58546 118 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 ADARB1P78563 741 aaKnown RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 DAG1Q14118 895 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 SELPLGQ14242 412 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 KIAA0040Q15053 153 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 CHRNA6Q15825 494 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 RFTN2Q52LD8 501 aaPredicted RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 LRRC23Q53EV4 343 aaPredicted RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 CCNYL2Q5T2Q4 361 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 GPRC6AQ5T6X5 926 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 TRIM46Q7Z4K8 759 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 DNAJB7Q7Z6W7 309 aaPredicted RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 ITIH5Q86UX2 942 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 FAM217AQ8IXS0 508 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 RGL4Q8IZJ4 473 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 FAM9CQ8IZT9 166 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 NXPE1Q8N323 547 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 OR2T12Q8NG77 320 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 DNAJB8Q8NHS0 232 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 MAGEE2Q8TD90 523 aaPredicted RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 ULK4Q96C45 1275 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 SDCCAG3Q96C92 435 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 RHBDF1Q96CC6 855 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 FBXL20Q96IG2 436 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 RDH12Q96NR8 316 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 HBEGFQ99075 208 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 NTMT1Q9BV86 223 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 HERC2P3Q9BVR0 1158 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 BOCQ9BWV1 1114 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 PIF1Q9H611 641 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 GORASP2Q9H8Y8 452 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 IL26Q9NPH9 171 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 LATS2Q9NRM7 1088 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 KCTD5Q9NXV2 234 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 KLQ9UEF7 1012 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.91□□□□□ -1.14
GPC3-204ENST00000631057 PRKAG2Q9UGJ0 569 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 USP22Q9UPT9 525 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 ZNF510Q9Y2H8 683 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 CCL27Q9Y4X3 112 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 PRSS21Q9Y6M0 314 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 COL4A6Q14031 1691 aa7.91□□□□□ -1.14
GPC3-204ENST00000631057 CXorf51AA0A1B0GTR3 108 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 EIF3FO00303 357 aaPredicted RBP7.9□□□□□ -1.14
GPC3-204ENST00000631057 FFAR3O14843 346 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 GPR42O15529 346 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 PRMT3O60678 531 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 SCELO95171 688 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 CLDN7O95471 211 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 SNAP29O95721 258 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 KRT6AP02538 564 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 MT-ND1P03886 318 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 KRT6BP04259 564 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 SERPINA4P29622 427 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 HNF1BP35680 557 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 KRT6CP48668 564 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 ARSFP54793 590 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 HPCAP84074 193 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 CYP4F3Q08477 520 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 DCTN2Q13561 401 aaKnown RBP7.9□□□□□ -1.14
GPC3-204ENST00000631057 RAB33AQ14088 237 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 MAPKAPK3Q16644 382 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 CDKN3Q16667 212 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 PHKG1Q16816 387 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 SPOUT1Q5T280 376 aaKnown RBP7.9□□□□□ -1.14
GPC3-204ENST00000631057 TPGS1Q6ZTW0 290 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 CLVS1Q8IUQ0 354 aaPredicted RBP7.9□□□□□ -1.14
GPC3-204ENST00000631057 TCEAL8Q8IYN2 117 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 OFCC1Q8IZS5 231 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 CPXM2Q8N436 756 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 LIX1Q8N485 282 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 OR52E4Q8NGH9 312 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 OR6K2Q8NGY2 324 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 ZNF420Q8TAQ5 688 aaPredicted RBP7.9□□□□□ -1.14
GPC3-204ENST00000631057 WFDC5Q8TCV5 224 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 GTF2H4Q92759 462 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 TMBIM1Q969X1 311 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 ZNF583Q96ND8 569 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 OSBPL6Q9BZF3 934 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 LRTM1Q9HBL6 345 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 C1orf109Q9NX04 203 aa7.9□□□□□ -1.14
GPC3-204ENST00000631057 ZNF490Q9ULM2 529 aaPredicted RBP7.9□□□□□ -1.14
GPC3-204ENST00000631057 MAFFQ9ULX9 164 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms