RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 MKS1Q9NXB0 559 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 OAZ3Q9UMX2 235 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 OR1A2Q9Y585 309 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 CCDC85CA6NKD9 419 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 K7ESM1 405 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 RTCAO00442 366 aaKnown RBP7.36□□□□□ -1.23
PKP4-217ENST00000628904 IFRD1O00458 451 aaPredicted RBP7.36□□□□□ -1.23
PKP4-217ENST00000628904 HS6ST1O60243 411 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 FOXD2O60548 495 aaPredicted RBP7.36□□□□□ -1.23
PKP4-217ENST00000628904 TULP3O75386 442 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 CTSAP10619 480 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 COL6A1P12109 1028 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 POU2F1P14859 743 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 FASP25445 335 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 OXTRP30559 389 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 CCR7P32248 378 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 CRATP43155 626 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 CHRNB3Q05901 458 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 ZNF33AQ06730 810 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 HKDC1Q2TB90 917 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 ZNF542PQ5EBM4 170 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 DUS1LQ6P1R4 473 aaKnown RBP7.36□□□□□ -1.23
PKP4-217ENST00000628904 ZNF683Q8IZ20 524 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 RGL4Q8IZJ4 473 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 OR4K1Q8NGD4 311 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 C2orf15Q8WU43 125 aaKnown RBP7.36□□□□□ -1.23
PKP4-217ENST00000628904 DLG3Q92796 817 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 PPP2R3CQ969Q6 453 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 OTULINQ96BN8 352 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 DPH2Q9BQC3 489 aaPredicted RBP7.36□□□□□ -1.23
PKP4-217ENST00000628904 RHBGQ9H310 441 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 GPSM3Q9Y4H4 160 aa7.36□□□□□ -1.23
PKP4-217ENST00000628904 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 GLOD5A6NK44 160 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 H3BNC9 293 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 RGS14O43566 566 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 NME6O75414 186 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 ZNF189O75820 626 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 ABLIM3O94929 683 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 CD160O95971 181 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 EPOP01588 193 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 EIF2S1P05198 315 aaKnown RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 UROSP10746 265 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 IDO1P14902 403 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 CYP2A7P20853 494 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 DNAJB1P25685 340 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 NSG1P42857 185 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 GNPDA1P46926 289 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 CNTN1Q12860 1018 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 SIM2Q14190 667 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 PRAMEF14Q5SWL7 426 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 KIAA1324Q6UXG2 1013 aaKnown RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 TPRG1Q6ZUI0 275 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 TCEAL8Q8IYN2 117 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 SFRP1Q8N474 314 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 PIH1D2Q8WWB5 315 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ABTB1Q969K4 478 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 SLC29A1Q99808 456 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 DGCR6LQ9BY27 220 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 MMADHCQ9H3L0 296 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 IL21Q9HBE4 155 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 SGK2Q9HBY8 427 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ARNT2Q9HBZ2 717 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 INTS10Q9NVR2 710 aaKnown RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 KCNK6Q9Y257 313 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 SCN10AQ9Y5Y9 1956 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 CACNA1CQ13936 2221 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 C16orf96A6NNT2 1141 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 NME4O00746 187 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 EI24O14681 340 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 CASQ2O14958 399 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 CLOCKO15516 846 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 TPST2O60704 377 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 PAPSS2O95340 614 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 EPORP19235 508 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ADSLP30566 484 aaPredicted RBP7.35□□□□□ -1.23
PKP4-217ENST00000628904 GSK3BP49841 420 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 RAP1GDS1P52306 607 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 PLA2G16P53816 162 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 OR4D2P58180 307 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 DGCR6Q14129 220 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 SPDYE7PQ495Y7 208 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 C9orf50Q5SZB4 431 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 UTS2BQ765I0 119 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 FBXL20Q96IG2 436 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ZNF599Q96NL3 588 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 DERL2Q9GZP9 239 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 PDFQ9HBH1 243 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.35□□□□□ -1.23
PKP4-217ENST00000628904 COMMD8Q9NX08 183 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ADGRE2Q9UHX3 823 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 PCTPQ9UKL6 214 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 TBX21Q9UL17 535 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 LZTS1Q9Y250 596 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 TBC1D30Q9Y2I9 924 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ALPK2Q86TB3 2170 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 RFXANKO14593 260 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 MYO1DO94832 1006 aa7.35□□□□□ -1.23
PKP4-217ENST00000628904 ACP5P13686 325 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms