RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 POLR2CP19387 275 aaPredicted RBP16.27■□□□□ 0.2
UBE3D-208ENST00000626828 CHRM3P20309 590 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 ARL4CP56559 192 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 TLE3Q04726 772 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 ABRQ12979 859 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 CTBP1Q13363 440 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 MSS51Q4VC12 460 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 SPANXN3Q5MJ09 141 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 DNTTIP2Q5QJE6 756 aaKnown RBP16.27■□□□□ 0.2
UBE3D-208ENST00000626828 ZNF470Q6ECI4 717 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 AMIGO1Q86WK6 493 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 ZFAND4Q86XD8 727 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 KMT5CQ86Y97 462 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 OR5AR1Q8NGP9 310 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 OR5K2Q8NHB8 316 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 LKAAEAR1Q8TD35 194 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 MAP3K3Q99759 626 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 ERP44Q9BS26 406 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 IL1RAPL1Q9NZN1 696 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 FOXJ2Q9P0K8 574 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 SSUH2Q9Y2M2 353 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 SNX24Q9Y343 169 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 B3GALT1Q9Y5Z6 326 aa16.27■□□□□ 0.2
UBE3D-208ENST00000626828 IGHV5-51A0A0C4DH38 117 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 TLCD2A6NGC4 264 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.26■□□□□ 0.19
UBE3D-208ENST00000626828 LIPCP11150 499 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 ARL4DP49703 201 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 UCNP55089 124 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 FOXM1Q08050 763 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 IL11RAQ14626 422 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 HIF1AQ16665 826 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 COL28A1Q2UY09 1125 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 HSP90AA5PQ58FG0 334 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 CTSL3PQ5NE16 218 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 ANKS6Q68DC2 871 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 CYB5D1Q6P9G0 228 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 TTC23LQ6PF05 361 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 UNC5DQ6UXZ4 953 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 KCNMB4Q86W47 210 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 VRK3Q8IV63 474 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 SLC41A2Q96JW4 573 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 FAM167BQ9BTA0 163 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 HGH1Q9BTY7 390 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 CCDC68Q9H2F9 335 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 CDC23Q9UJX2 597 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 FBXO5Q9UKT4 447 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 TDRKHQ9Y2W6 561 aaKnown RBP16.26■□□□□ 0.19
UBE3D-208ENST00000626828 MRFAP1Q9Y605 127 aa16.26■□□□□ 0.19
UBE3D-208ENST00000626828 E5RI56 91 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 STMND1H3BQB6 276 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 BTN3A3O00478 584 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 ZBTB11O95625 1053 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 PRDX3P30048 256 aaKnown RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 SHMT2P34897 504 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 ELK3P41970 407 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 RPL21P46778 160 aaKnown RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 PPP1CAP62136 330 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 HSD11B2P80365 405 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 CALCOCO2Q13137 446 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 CBLBQ13191 982 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 CLN3Q13286 438 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 CRYMQ14894 314 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 ZNF789Q5FWF6 425 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 BPHLQ86WA6 291 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 DTX1Q86Y01 620 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 IGDCC3Q8IVU1 814 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 DENND6AQ8IWF6 608 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 SIDT2Q8NBJ9 832 aaKnown RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 CFAP61Q8NHU2 1237 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 C16orf45Q96MC5 204 aaPredicted RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 FOPNLQ96NB1 174 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 CTRCQ99895 268 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 XKR8Q9H6D3 395 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 C1GALT1Q9NS00 363 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 IARS2Q9NSE4 1012 aaKnown RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 SIDT1Q9NXL6 827 aaKnown RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 OR6C2Q9NZP2 312 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 WHRNQ9P202 907 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 KLHL42Q9P2K6 505 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 ZC3H7BQ9UGR2 993 aaKnown RBP16.25■□□□□ 0.19
UBE3D-208ENST00000626828 COMMD10Q9Y6G5 202 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 TEX264Q9Y6I9 313 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 SDK2Q58EX2 2172 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 SPTBP11277 2137 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 FAM208BQ5VWN6 2430 aa16.25■□□□□ 0.19
UBE3D-208ENST00000626828 PCM1Q15154 2024 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 WDFY3Q8IZQ1 3526 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 GSAPA4D1B5 854 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 C2orf74A8MZ97 194 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 BTN3A1O00481 513 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 MAP3K7O43318 606 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 RAD51CO43502 376 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 NIPSNAP2O75323 286 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 BANF1O75531 89 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 URI1O94763 535 aaPredicted RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 HAUS5O94927 633 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 KPNA2P52292 529 aaKnown RBP16.24■□□□□ 0.19
UBE3D-208ENST00000626828 ACY1Q03154 408 aa16.24■□□□□ 0.19
UBE3D-208ENST00000626828 CKAP4Q07065 602 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms