RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 MBOAT4Q96T53 435 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 OSBPL10Q9BXB5 764 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 CD244Q9BZW8 370 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 AMBRA1Q9C0C7 1298 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 HPS4Q9NQG7 708 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 TMEM9Q9P0T7 183 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 GNPTGQ9UJJ9 305 aa11.04□□□□□ -0.64
VARS2-213ENST00000625423 KIAA0100Q14667 2235 aaKnown RBP11.04□□□□□ -0.64
VARS2-213ENST00000625423 ABCB7O75027 752 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 SEC14L2O76054 403 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 HPRP00739 348 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 HMGA1P17096 107 aaKnown RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 JUNBP17275 347 aaPredicted RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 MSH3P20585 1137 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 PRKACGP22612 351 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 GNPDA1P46926 289 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 DEFB115Q30KQ5 88 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 TTC23Q5W5X9 447 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 GCNT7Q6ZNI0 430 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 RGL4Q8IZJ4 473 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 PIH1D2Q8WWB5 315 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 MYO19Q96H55 970 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 CNDP2Q96KP4 475 aaKnown RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 SLC6A13Q9NSD5 602 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 TBC1D23Q9NUY8 699 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 TRPM5Q9NZQ8 1165 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 INVSQ9Y283 1065 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 C1orf232A0A0U1RR37 186 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 A8MX80 341 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 LOC730098B7Z3J9 87 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 SLC28A1O00337 649 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 HNRNPCP07910 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
VARS2-213ENST00000625423 DGKAP23743 735 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 GKP32189 559 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 TMBIM6P55061 237 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 PIGFQ07326 219 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 ELAVL2Q12926 359 aaKnown RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 MAD2L1Q13257 205 aaPredicted RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 NFATC2Q13469 925 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 ZNF829Q3KNS6 432 aaPredicted RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 RBM48Q5RL73 367 aaKnown RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 CACHD1Q5VU97 1274 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 RBFAQ8N0V3 343 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 PAF1Q8N7H5 531 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 NAT16Q8N8M0 369 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 GIPC3Q8TF64 312 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 BORCS5Q969J3 196 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 NCLNQ969V3 563 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 RHBDF1Q96CC6 855 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 FEM1AQ9BSK4 669 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 LRTM1Q9HBL6 345 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 FAIMQ9NVQ4 179 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 VPS51Q9UID3 782 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 LRFN2Q9ULH4 789 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 NBNO60934 754 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 PGLSO95336 258 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 CLDN7O95471 211 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 SEC24AO95486 1093 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 IL6P05231 212 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 INHBBP09529 407 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 COL6A1P12109 1028 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 RPS3P23396 243 aaKnown RBP eCLIP11.03□□□□□ -0.642e-8■■□□□ 13.5
VARS2-213ENST00000625423 TUFMP49411 452 aaKnown RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 PPP2R2BQ00005 443 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 INO80DQ53TQ3 878 aaPredicted RBP11.03□□□□□ -0.64
VARS2-213ENST00000625423 RUNDC3AQ59EK9 446 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 SPARTQ8N0X7 666 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 ZBTB2Q8N680 514 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 ZNF555Q8NEP9 628 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 ULK4Q96C45 1275 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 OR52E6Q96RD3 313 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 IL26Q9NPH9 171 aa11.03□□□□□ -0.64
VARS2-213ENST00000625423 K7EPI3 171 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 AREL1O15033 823 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 CSKP41240 450 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 C21orf59P57076 290 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 SP3Q02447 781 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 KCNAB2Q13303 367 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 PLD1Q13393 1074 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 BFSP2Q13515 415 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 PON2Q15165 354 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 CTU2Q2VPK5 515 aaKnown RBP11.02□□□□□ -0.64
VARS2-213ENST00000625423 C6orf141Q5SZD1 244 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 LRRC8DQ7L1W4 858 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 SNX20Q7Z614 316 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 TMEM179BQ7Z7N9 219 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 RBM23Q86U06 439 aaKnown RBP11.02□□□□□ -0.64
VARS2-213ENST00000625423 C10orf111Q8N326 155 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 GLB1L3Q8NCI6 653 aaPredicted RBP11.02□□□□□ -0.64
VARS2-213ENST00000625423 CHDHQ8NE62 594 aaPredicted RBP11.02□□□□□ -0.64
VARS2-213ENST00000625423 OVCA2Q8WZ82 227 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 HDAC2Q92769 488 aaKnown RBP11.02□□□□□ -0.64
VARS2-213ENST00000625423 CAPNS2Q96L46 248 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 CSF3RQ99062 836 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 KLF16Q9BXK1 252 aaPredicted RBP11.02□□□□□ -0.64
VARS2-213ENST00000625423 CLMPQ9H6B4 373 aa11.02□□□□□ -0.64
VARS2-213ENST00000625423 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms