RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 CNOT11Q9UKZ1 510 aaKnown RBP19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC27A6Q9Y2P4 619 aa19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 POLR3HQ9Y535 204 aaPredicted RBP19.29■□□□□ 0.68
PCDHB11-202ENST00000624887 C16orf96A6NNT2 1141 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 IFRD1O00458 451 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 MANBAO00462 879 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 ADH1CP00326 375 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 HIST1H2AGP0C0S8 130 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 HIST1H2ADP20671 130 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 XPAP23025 273 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 HNMTP50135 292 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 MAD2L1Q13257 205 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 TCEAL5Q5H9L2 206 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 FAM109BQ6ICB4 259 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 LCN8Q6JVE9 175 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 PDE12Q6L8Q7 609 aaKnown RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 NEK10Q6ZWH5 1172 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 LRRC70Q7Z2Q7 622 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 KIAA2013Q8IYS2 634 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 GOLM1Q8NBJ4 401 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 SKA2Q8WVK7 121 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 HIST1H2AHQ96KK5 128 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 HIST1H2AJQ99878 128 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 H2AFJQ9BTM1 129 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 RIOK2Q9BVS4 552 aaKnown RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 PIDD1Q9HB75 910 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 FARSBQ9NSD9 589 aaKnown RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 ARMC1Q9NVT9 282 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 ACTR3BQ9P1U1 418 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 ZNF490Q9ULM2 529 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 FADS2P1A8MWK0 482 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 ARNTLO00327 626 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 CLDN9O95484 217 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC2A4P14672 509 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 ZXDCQ2QGD7 858 aaPredicted RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 TECPR1Q7Z6L1 1165 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 RBM23Q86U06 439 aaKnown RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 C12orf40Q86WS4 652 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 LRTOMTQ8WZ04 291 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 RSPRY1Q96DX4 576 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 MUC13Q9H3R2 512 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 SLAMF8Q9P0V8 285 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 RAB26Q9ULW5 256 aa19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 EIF3LQ9Y262 564 aaKnown RBP19.28■□□□□ 0.68
PCDHB11-202ENST00000624887 C15orf38-AP3S2A0A0A6YYH1 394 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 DENRO43583 198 aaKnown RBP19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 FTH1P02794 183 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 CA3P07451 260 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 PIM1P11309 404 aaPredicted RBP19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 MMP12P39900 470 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 SLC6A12P48065 614 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 GSK3BP49841 420 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 RPL38P63173 70 aaKnown RBP19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 ZNF284Q2VY69 593 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 RABL3Q5HYI8 236 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 HABP4Q5JVS0 413 aaKnown RBP19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 OR52E8Q6IFG1 317 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 PRR23BQ6ZRT6 265 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 ARPINQ7Z6K5 226 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 CANT1Q8WVQ1 401 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 SMG7Q92540 1137 aaKnown RBP19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 ALG2Q9H553 416 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 EGFL7Q9UHF1 273 aa19.27■□□□□ 0.68
PCDHB11-202ENST00000624887 PABPN1LA6NDY0 278 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ZNF839A8K0R7 811 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 QSOX1O00391 747 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 TULP3O75386 442 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 CYP2A7P20853 494 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 CASP2P42575 452 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 GNPDA1P46926 289 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 AP1S2P56377 157 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 EEFSECP57772 596 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ST8SIA6P61647 398 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 NANOGP8Q6NSW7 305 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 FBXL19Q6PCT2 694 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 SLC2A7Q6PXP3 512 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 PTRH1Q86Y79 214 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ZNF366Q8N895 744 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 BTN2A2Q8WVV5 523 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ASZ1Q8WWH4 475 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ELMO1Q92556 727 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 VPS35Q96QK1 796 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 FAM83CQ9BQN1 747 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 TRIM8Q9BZR9 551 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 Q9H521 79 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ACTR8Q9H981 624 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 NANOGQ9H9S0 305 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 CCM2LQ9NUG4 571 aaPredicted RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 ASIC5Q9NY37 505 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 CNOT6Q9ULM6 557 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 TXNDC9O14530 226 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 RSL1D1O76021 490 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 KRT6AP02538 564 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 KRT6BP04259 564 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 VARSP26640 1264 aaKnown RBP19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 VIPR2P41587 438 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 KRT6CP48668 564 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 HMGCS1Q01581 520 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 LIPEQ05469 1076 aa19.26■□□□□ 0.67
PCDHB11-202ENST00000624887 KIAA0040Q15053 153 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms