RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SHQ1Q6PI26 577 aaKnown RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 IL27RAQ6UWB1 636 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CCBE1Q6UXH8 406 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 TUBA1AQ71U36 451 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 UTS2BQ765I0 119 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 PRRT2Q7Z6L0 340 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 MSRB3Q8IXL7 192 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 METTL4Q8N3J2 472 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 GTF2H4Q92759 462 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 MYLPFQ96A32 169 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 ZFP42Q96MM3 310 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 ZNF382Q96SR6 550 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CSNK1G1Q9HCP0 422 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 SLC25A37Q9NYZ2 338 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 GMPPBQ9Y5P6 360 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 HS3ST4Q9Y661 456 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 HSPE1-MOB4S4R3N1 261 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 FAM172BPA6NC97 362 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 AREL1O15033 823 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CREG1O75629 220 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 GJB3O75712 270 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 RETP07949 1114 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 PIRTP0C851 137 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 CXCR2P25025 360 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 ARL1P40616 181 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 ADCYAP1R1P41586 468 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 TYSND1Q2T9J0 566 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 RFTN2Q52LD8 501 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 PNCKQ6P2M8 343 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 HEATR4Q86WZ0 1026 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 MICU2Q8IYU8 434 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 OR10Q1Q8NGQ4 319 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 SCAMP5Q8TAC9 235 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 ARRDC2Q8TBH0 407 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 GPR21Q99679 349 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 OR2B2Q9GZK3 357 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CCNB1IP1Q9NPC3 277 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 ITM2CQ9NQX7 267 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 CDH9Q9ULB4 789 aa13.85□□□□□ -0.19
LDB3-209ENST00000623056 EIF3LQ9Y262 564 aaKnown RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 MN1Q10571 1320 aaPredicted RBP13.85□□□□□ -0.19
LDB3-209ENST00000623056 HOXC11O43248 304 aaPredicted RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 PARNO95453 639 aaKnown RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 KRT8P05787 483 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 CAPN1P07384 714 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 KRT20P35900 424 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 UGT2B10P36537 528 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 LIPAP38571 399 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 SYT16Q17RD7 645 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 AP5B1Q2VPB7 878 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 TPRG1LQ5T0D9 272 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 UBE2UQ5VVX9 321 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 CPZQ66K79 652 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 SPATC1Q76KD6 591 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 GDPD3Q7L5L3 318 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 SYTL1Q8IYJ3 562 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 PGBD5Q8N414 524 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 CELF2-AS1Q8N7Q2 184 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 METTL6Q8TCB7 284 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 NETO1Q8TDF5 533 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 SLC38A4Q969I6 547 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 TADA1Q96BN2 335 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 CEP44Q9C0F1 390 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 ERVW-1Q9UQF0 538 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 HAT1O14929 419 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 AIREO43918 545 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 ALOX12P18054 663 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 ITGB6P18564 788 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 GGT5P36269 586 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 DAPP51397 102 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 ARPC4P59998 168 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 PTGR1Q14914 329 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 MAD2L1BPQ15013 274 aaPredicted RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 GCNT7Q6ZNI0 430 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 TMEM86AQ8N2M4 240 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 PARP16Q8N5Y8 322 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 EMID1Q96A84 441 aaPredicted RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 PDLIM5Q96HC4 596 aaKnown RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 APOL4Q9BPW4 351 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 ITPAQ9BY32 194 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 GABARAPL1Q9H0R8 117 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 ZNF408Q9H9D4 720 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 SP110Q9HB58 689 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 CD274Q9NZQ7 290 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 CAB39Q9Y376 341 aaPredicted RBP13.84□□□□□ -0.19
LDB3-209ENST00000623056 PCDHGA3Q9Y5H0 932 aa13.84□□□□□ -0.19
LDB3-209ENST00000623056 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
LDB3-209ENST00000623056 ARVCFO00192 962 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 MRPS14O60783 128 aaKnown RBP13.83□□□□□ -0.2
LDB3-209ENST00000623056 PGLSO95336 258 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 DBTP11182 482 aaKnown RBP13.83□□□□□ -0.2
LDB3-209ENST00000623056 AKT1P31749 480 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 PGFP49763 221 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 GALNT3Q14435 633 aa13.83□□□□□ -0.2
LDB3-209ENST00000623056 PCBP1Q15365 356 aaKnown RBP eCLIP13.83□□□□□ -0.2
LDB3-209ENST00000623056 GPR162Q16538 588 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms