RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TUBB4BP68371 445 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 MAT1AQ00266 395 aaKnown RBP4.66□□□□□ -1.66
CPNE3-213ENST00000622183 E2F5Q15329 346 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 MDH1BQ5I0G3 518 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 NDUFAF5Q5TEU4 345 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 SFMBT2Q5VUG0 894 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 FAM171BQ6P995 826 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 SPATA21Q7Z572 469 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 TMPRSS11BQ86T26 416 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 CTAGE4Q8IX94 777 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 CPSF7Q8N684 471 aaKnown RBP4.66□□□□□ -1.66
CPNE3-213ENST00000622183 LNX1Q8TBB1 728 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-213ENST00000622183 UBE2Q2Q8WVN8 375 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 SYN2Q92777 582 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-213ENST00000622183 NEUROG1Q92886 237 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 ZNF479Q96JC4 524 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 MLPHQ9BV36 600 aaPredicted RBP4.66□□□□□ -1.66
CPNE3-213ENST00000622183 KATNB1Q9BVA0 655 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 FKRPQ9H9S5 495 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 EBF2Q9HAK2 575 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 TRPC7Q9HCX4 862 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 TBC1D7Q9P0N9 293 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 POLLQ9UGP5 575 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 RNF150Q9ULK6 438 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 SNX7Q9UNH6 387 aa4.66□□□□□ -1.66
CPNE3-213ENST00000622183 IGHV4OR15-8A0A075B7B6 117 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 NEMP2A6NFY4 417 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 DNM1LO00429 736 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 AP5Z1O43299 807 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 KRT19P08727 400 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 SUPT20HL2P0C7V6 817 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 CDH1P12830 882 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 AZGP1P25311 298 aaKnown RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 SLC6A6P31641 620 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 CDKN2AP42771 156 aaKnown RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 CRKLP46109 303 aaKnown RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 MFAP5Q13361 173 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 DUOXA1Q1HG43 343 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 TYSND1Q2T9J0 566 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 TWISTNBQ3B726 338 aaPredicted RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 ZNF517Q6ZMY9 492 aaPredicted RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 PIWIL3Q7Z3Z3 882 aaKnown RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 LONP2Q86WA8 852 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 SPATA2LQ8IUW3 424 aaPredicted RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 GPALPP1Q8IXQ4 340 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 DCP1BQ8IZD4 617 aaKnown RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 OCC1Q8TAD7 63 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 RNF128Q8TEB7 428 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 SSMEM1Q8WWF3 244 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 DHX58Q96C10 678 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 LINGO1Q96FE5 620 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 INPP5KQ9BT40 448 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 TM6SF1Q9BZW5 370 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 VN1R1Q9GZP7 353 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 FN3KQ9H479 309 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 Q9N2K0 584 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 MALT1Q9UDY8 824 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 POU2F3Q9UKI9 436 aa4.65□□□□□ -1.67
CPNE3-213ENST00000622183 RALYQ9UKM9 306 aaKnown RBP4.65□□□□□ -1.67
CPNE3-213ENST00000622183 H0YAE9 185 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 ACSL3O95573 720 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 CSN3P07498 182 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 NGFRP08138 427 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 PLA2G4BP0C869 781 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 ACP2P11117 423 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 CBLP22681 906 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 TKTP29401 623 aaKnown RBP4.64□□□□□ -1.67
CPNE3-213ENST00000622183 OAS2P29728 719 aaKnown RBP4.64□□□□□ -1.67
CPNE3-213ENST00000622183 HTR6P50406 440 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 MAPK12P53778 367 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 DSCR9P59020 149 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
CPNE3-213ENST00000622183 UGCGQ16739 394 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 MEP1BQ16820 701 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 SYT14P1Q58G82 188 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 NHSL2Q5HYW2 709 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 SHEQ5VZ18 495 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 PIWIL4Q7Z3Z4 852 aaKnown RBP4.64□□□□□ -1.67
CPNE3-213ENST00000622183 COMMD2Q86X83 199 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 SNX32Q86XE0 403 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 CRYBG2Q8N1P7 616 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 ARHGAP24Q8N264 748 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 ATAD1Q8NBU5 361 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 HES6Q96HZ4 224 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 SPATA33Q96N06 139 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 CDH20Q9HBT6 801 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 SERINC1Q9NRX5 453 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 B3GAT1Q9P2W7 334 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 LRWD1Q9UFC0 647 aa4.64□□□□□ -1.67
CPNE3-213ENST00000622183 A0A0U1RQK1 487 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ZNF320A2RRD8 509 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 FAM86B1E9PN63 330 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 INO80B-WBP1J3KQ70 363 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 IFIT3O14879 490 aaKnown RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 RNASEH1O60930 286 aaKnown RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ZBTB11O95625 1053 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ALPLP05186 524 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 VIMP08670 466 aaKnown RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 FAM86B2P0C5J1 330 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms