RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 TYMPP19971 482 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 CA6P23280 308 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 HOXD13P35453 343 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 GEMIN4P57678 1058 aaKnown RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 EPS8Q12929 822 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 DCAF10Q5QP82 559 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 ZNF772Q68DY9 489 aaPredicted RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 PSRC1Q6PGN9 363 aaPredicted RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 SLC16A9Q7RTY1 509 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 CEP57Q86XR8 500 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 LSMEM2Q8N112 164 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 SCML4Q8N228 414 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 MARVELD2Q8N4S9 558 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 TRIML1Q8N9V2 468 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 ZNF653Q96CK0 615 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 POM121L2Q96KW2 1035 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 LMF2Q9BU23 707 aaKnown RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 MCRIP2Q9BUT9 160 aaKnown RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 LAT2Q9GZY6 243 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 DPAGT1Q9H3H5 408 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 TBC1D22BQ9NU19 505 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 ZNF701Q9NV72 531 aaPredicted RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 ARHGEF38Q9NXL2 777 aa3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 MRPS28Q9Y2Q9 187 aaKnown RBP3.29□□□□□ -1.88
CCDC144B-209ENST00000621104 COL2A1P02458 1487 aaPredicted RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 CTDSP2O14595 271 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 ZNF197O14709 1029 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 KLF11O14901 512 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 DCXO43602 365 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 AVILO75366 819 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 KHDRBS3O75525 346 aaKnown RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 NGFP01138 241 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 RAF1P04049 648 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 CA4P22748 312 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 MAGEA11P43364 429 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 CLK1P49759 484 aaKnown RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 TAF6P49848 677 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 PDX1P52945 283 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 TMEM187Q14656 261 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 AACSQ86V21 672 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 ZNF843Q8N446 348 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 DNAJC22Q8N4W6 341 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 AFAP1Q8N556 730 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 POC5Q8NA72 575 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 PTPMT1Q8WUK0 201 aaPredicted RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 DYRK2Q92630 601 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 TEX12Q9BXU0 123 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 MRPL1Q9BYD6 325 aaKnown RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 BLOC1S4Q9NUP1 217 aa3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 KLHL8Q9P2G9 620 aaPredicted RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 ZNF215Q9UL58 517 aaPredicted RBP3.28□□□□□ -1.88
CCDC144B-209ENST00000621104 MYH15Q9Y2K3 1946 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 LOC102723996A0A087X1L8 192 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 A0A1W2PQ09 198 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 HYKKA2RU49 373 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 EXTL3O43909 919 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 OR10H2O60403 315 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 TSPAN1O60635 241 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 WDPCPO95876 746 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 TBX6O95947 436 aaPredicted RBP3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 TPOP07202 933 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 CSH1P0DML2 217 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 CSH2P0DML3 217 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 ALOX12P18054 663 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 TRIM21P19474 475 aaKnown RBP3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 NRIP1P48552 1158 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 EIF5P55010 431 aaKnown RBP3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 HERV-K104P61576 105 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 CDR2Q01850 454 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 CHAF1BQ13112 559 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 PWWP2BQ6NUJ5 590 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 FIGLAQ6QHK4 219 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 KBTBD6Q86V97 674 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 OR2AJ1Q8NGZ0 328 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 OR2T11Q8NH01 316 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 OLIG1Q8TAK6 271 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 HPSE2Q8WWQ2 592 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 ZNF689Q96CS4 500 aaPredicted RBP3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 FNBP1Q96RU3 617 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 PAFAH2Q99487 392 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 TRIM51Q9BSJ1 452 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 TRAF4Q9BUZ4 470 aaPredicted RBP3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 GHITMQ9H3K2 345 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 HAUS2Q9NVX0 235 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 OSER1Q9NX31 292 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 SPHK1Q9NYA1 384 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 VPS28Q9UK41 221 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 MTUS1Q9ULD2 1270 aa3.27□□□□□ -1.89
CCDC144B-209ENST00000621104 A0A0J9YWU9 116 aa3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 ANKRD18BA2A2Z9 1011 aa3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 XRCC3O43542 346 aa3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 CDC123O75794 336 aaPredicted RBP3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 GJA1P17302 382 aa3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 SNRPD1P62314 119 aaKnown RBP3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 SIM2Q14190 667 aaPredicted RBP3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 PCLAFQ15004 111 aa3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 WTAPQ15007 396 aa3.26□□□□□ -1.89
CCDC144B-209ENST00000621104 MEA1Q16626 185 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms