RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ITPAQ9BY32 194 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 NLNQ9BYT8 704 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 ANKHQ9HCJ1 492 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 SSU72Q9NP77 194 aaKnown RBP4.96□□□□□ -1.62
VPS13D-214ENST00000620676 KANSL3Q9P2N6 904 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM5Q9Y2B1 443 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CLDN5O00501 218 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 FPGTO14772 594 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 GMDSO60547 372 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CHRNA1P02708 482 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CPB1P15086 417 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 FAM174BQ3ZCQ3 159 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 BBS12Q6ZW61 710 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 MIB1Q86YT6 1006 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 METTL4Q8N3J2 472 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CCDC74BQ96LY2 380 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 SLC2A11Q9BYW1 496 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CTPS2Q9NRF8 586 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 MRPL22Q9NWU5 206 aaKnown RBP4.96□□□□□ -1.62
VPS13D-214ENST00000620676 OR6C65A6NJZ3 312 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 GJB1P08034 283 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 UBL4AP11441 157 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 S100A10P60903 97 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 RAB8AP61006 207 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 ABRQ12979 859 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CPSF6Q16630 551 aaKnown RBP eCLIP4.96□□□□□ -1.62
VPS13D-214ENST00000620676 MRNIPQ6NTE8 343 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 PHACTR4Q8IZ21 702 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 Q8N402 240 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 STOML3Q8TAV4 291 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 ACMSDQ8TDX5 336 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 ADAMTS14Q8WXS8 1223 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 CCDC17Q96LX7 622 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 RTFDC1Q9BY42 306 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-214ENST00000620676 COPS3Q9UNS2 423 aa4.96□□□□□ -1.62
VPS13D-214ENST00000620676 C2orf92A0A1B0GVN3 265 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PDGFAP04085 211 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ADORA2AP29274 412 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 GMFBP60983 142 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 MAXP61244 160 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PTPN11Q06124 597 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NFE2Q16621 373 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 C10orf120Q5SQS8 335 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM179Q6ZVK1 233 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PIM3Q86V86 326 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 WDR49Q8IV35 697 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 KRTCAP2Q8N6L1 136 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ZFP42Q96MM3 310 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FAM83DQ9H4H8 585 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ARNT2Q9HBZ2 717 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OXSMQ9NWU1 459 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HCN2Q9UL51 889 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 LCHNA4D1U4 455 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 CBX4O00257 560 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SAP18O00422 153 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 STSP08842 583 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 INAVAQ3KP66 663 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NHSL2Q5HYW2 709 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SYT12Q8IV01 421 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF420Q8TAQ5 688 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RNF146Q9NTX7 359 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ALG5Q9Y673 324 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OAZ2O95190 189 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SDHBP21912 280 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 F8A1P23610 371 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FSHRP23945 695 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HTR1BP28222 390 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 AFF1P51825 1210 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PSMA6P60900 246 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FUT2Q10981 343 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PPIL2Q13356 520 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ODF4Q2M2E3 257 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 PUS10Q3MIT2 529 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 KBTBD6Q86V97 674 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ARMC10Q8N2F6 343 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SAMD12Q8N8I0 201 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NAT8LQ8N9F0 302 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 OR10T2Q8NGX3 314 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TFAP2BQ92481 460 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 COPS8Q99627 209 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 ZNF649Q9BS31 505 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FUZQ9BT04 418 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 IL22Q9GZX6 179 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 TMEM168Q9H0V1 697 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 NANOGQ9H9S0 305 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SUCOQ9UBS9 1254 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FARSAQ9Y285 508 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 AAR2Q9Y312 384 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 LAMC1P11047 1609 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 C2orf81A6NN90 581 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 B8ZZF3 427 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 FABP3P05413 133 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HIST1H2AGP0C0S8 130 aaPredicted RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SYN1P17600 705 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 HIST1H2ADP20671 130 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RGS19P49795 217 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 RPL26P61254 145 aaKnown RBP4.95□□□□□ -1.62
VPS13D-214ENST00000620676 SLC3A1Q07837 685 aa4.95□□□□□ -1.62
VPS13D-214ENST00000620676 C1orf189Q5VU69 101 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms