RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 BAG5Q9UL15 447 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 DHRS7Q9Y394 339 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 POLR3HQ9Y535 204 aaPredicted RBP12.83□□□□□ -0.36
SKP2-209ENST00000620197 ANAPC1Q9H1A4 1944 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 C1orf232A0A0U1RR37 186 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 TTC34A8MYJ7 566 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 CXCR6O00574 342 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 INSIG1O15503 277 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 NDUFS2O75306 463 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 ARHGEF15O94989 841 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 IL6P05231 212 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 MASP1P48740 699 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 CDC20Q12834 499 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 GTF2H2Q13888 395 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 AP5B1Q2VPB7 878 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 SDHAF4Q5VUM1 108 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 CPZQ66K79 652 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 KDM4DQ6B0I6 523 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 GTF2H2CQ6P1K8 395 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 GLT6D1Q7Z4J2 308 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 FAM126BQ8IXS8 530 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 ZNF513Q8N8E2 541 aaPredicted RBP12.83□□□□□ -0.36
SKP2-209ENST00000620197 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 EID2BQ96D98 161 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 ITGB1BP2Q9UKP3 347 aa12.83□□□□□ -0.36
SKP2-209ENST00000620197 TNPO3Q9Y5L0 923 aaKnown RBP12.83□□□□□ -0.36
SKP2-209ENST00000620197 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 TBC1D4O60343 1298 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 FZD6O60353 706 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 BMP4P12644 408 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 TACR2P21452 398 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 PRPH2P23942 346 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 SOX11P35716 441 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 PTGER3P43115 390 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 EFEMP1Q12805 493 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 FADDQ13158 208 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 LAPTM5Q13571 262 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 IMPG1Q17R60 797 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 RFX4Q33E94 735 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 FAM26DQ5JW98 314 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 CYP4Z1Q86W10 505 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 MICU2Q8IYU8 434 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 TRPV1Q8NER1 839 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 SPATA17Q96L03 361 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 OBSL1O75147 1896 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 ELOVL7A1L3X0 281 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 NDUFS3O75489 264 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 PRKD3O94806 890 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 RPS3P23396 243 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■■■■■ 42.4
SKP2-209ENST00000620197 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 CLK3P49761 638 aaKnown RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 ZNF235Q14590 738 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 PTGR1Q14914 329 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 IL27RAQ6UWB1 636 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 TTC9BQ8N6N2 239 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 ZNF555Q8NEP9 628 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 OR10A6Q8NH74 314 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 NDNFQ8TB73 568 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 NTMT1Q9BV86 223 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 HMG20AQ9NP66 347 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 OARD1Q9Y530 152 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 M0QZ92 97 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 WDR47O94967 919 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 NTRK1P04629 796 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 LPOP22079 712 aaPredicted RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 FSHRP23945 695 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 HOXA9P31269 272 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 GRK4P32298 578 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 CASP2P42575 452 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 RAPSNQ13702 412 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 HIST2H2ACQ16777 129 aaPredicted RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 IQCCQ4KMZ1 466 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 SUSD1Q6UWL2 747 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 DCBLD1Q8N8Z6 715 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 CHAC2Q8WUX2 184 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 SCHIP1Q9P0W5 487 aaPredicted RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 FKBPLQ9UIM3 349 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 TRMT6Q9UJA5 497 aaKnown RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 C3orf18Q9UK00 162 aa12.82□□□□□ -0.36
SKP2-209ENST00000620197 NDRG4Q9ULP0 352 aaKnown RBP12.82□□□□□ -0.36
SKP2-209ENST00000620197 PRMT5O14744 637 aaPredicted RBP12.81□□□□□ -0.36
SKP2-209ENST00000620197 DPM1O60762 260 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 CREG1O75629 220 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 OTCP00480 354 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 RPLP2P05387 115 aaKnown RBP12.81□□□□□ -0.36
SKP2-209ENST00000620197 CD52P31358 61 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 TRIM71Q2Q1W2 868 aaKnown RBP12.81□□□□□ -0.36
SKP2-209ENST00000620197 LDLRAP1Q5SW96 308 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 SNX20Q7Z614 316 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 LACC1Q8IV20 430 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 NETO1Q8TDF5 533 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 CCDC97Q96F63 343 aaPredicted RBP12.81□□□□□ -0.36
SKP2-209ENST00000620197 PITX2Q99697 317 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 ADNPQ9H2P0 1102 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 MARCH2Q9P0N8 246 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 PGRP06401 933 aa12.81□□□□□ -0.36
SKP2-209ENST00000620197 ALOX5P09917 674 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms