RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LIN37Q96GY3 246 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 APOLD1Q96LR9 279 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ZPBPQ9BS86 351 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 TMEM121BQ9BXQ6 578 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 DPH1Q9BZG8 443 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 STRADBQ9C0K7 418 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 LRMDAQ9H2I8 198 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 DCLRE1BQ9H816 532 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 TRIM39Q9HCM9 518 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 WASH6PQ9NQA3 447 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 MRGBPQ9NV56 204 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 BFARQ9NZS9 450 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 MCM8Q9UJA3 840 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 MOSPD1Q9UJG1 213 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PADI4Q9UM07 663 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CHMP2BQ9UQN3 213 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 TEX264Q9Y6I9 313 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 OR2AG2A6NM03 316 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 NTN3O00634 580 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KMOO15229 486 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GRID2O43424 1007 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 HYAL3O43820 417 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 NOBOXO60393 691 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 EDF1O60869 148 aaKnown RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 PIAS1O75925 651 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KRT37O76014 449 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CDK14O94921 469 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 VAPBO95292 243 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 MT-CO3P00414 261 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 RALBP11234 206 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ACP5P13686 325 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TAC1P20366 129 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ITGALP20701 1170 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ACRV1P26436 265 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GABRB3P28472 473 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 PTPN4P29074 926 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CCKBRP32239 447 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 PPARGP37231 505 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ELK3P41970 407 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ABCG1P45844 678 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SLCO1A2P46721 670 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SERPINB9P50453 376 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CLCN2P51788 898 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SH3BGRP55822 239 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CLDN6P56747 220 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GPX6P59796 221 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TIAL1Q01085 375 aaKnown RBP eCLIP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 INSM1Q01101 510 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CACNG1Q06432 222 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TMEM115Q12893 351 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KRT72Q14CN4 511 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 HIF1AQ16665 826 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 PLA2G4EQ3MJ16 856 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GPR33Q49SQ1 333 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 C14orf28Q4W4Y0 310 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ZRANB3Q5FWF4 1079 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CTSL3PQ5NE16 218 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 LDLRAP1Q5SW96 308 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TMEM164Q5U3C3 297 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 AGAP9Q5VTM2 703 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ATG16L1Q676U5 607 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KIAA0930Q6ICG6 404 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KLHL35Q6PF15 583 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SLC30A9Q6PML9 568 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TMEM220Q6QAJ8 160 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 WDR74Q6RFH5 385 aaPredicted RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 AFTPHQ6ULP2 937 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 NAPRTQ6XQN6 538 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 UNC5AQ6ZN44 842 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 C3orf62Q6ZUJ4 267 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 DET1Q7L5Y6 550 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TAF8Q7Z7C8 310 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 GALNT13Q8IUC8 556 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ANKMY2Q8IV38 441 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 DENND6AQ8IWF6 608 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 KYQ8NBH2 561 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 OR6P1Q8NGX9 317 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 OR4L1Q8NH43 312 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 SNIP1Q8TAD8 396 aaKnown RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 IFI44Q8TCB0 444 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 MAPK15Q8TD08 544 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 FGF11Q92914 225 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 STAMBPL1Q96FJ0 436 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 WBP1Q96G27 269 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CFAP36Q96G28 342 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CNTNAP3BQ96NU0 1288 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 OR2M4Q96R27 311 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TTC1Q99614 292 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 NRTNQ99748 197 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 EBNA1BP2Q99848 306 aaKnown RBP5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TIMM29Q9BSF4 260 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 NAT9Q9BTE0 207 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 DHRS4Q9BTZ2 278 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 TRIM55Q9BYV6 548 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CNTNAP3Q9BZ76 1288 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 RABEP2Q9H5N1 569 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 CXorf56Q9H5V9 222 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 ACSS3Q9H6R3 686 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 VPS37BQ9H9H4 285 aa5.14□□□□□ -1.59
SHMT1-211ENST00000618902 POLR1BQ9H9Y6 1135 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms