RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 MAP10Q9P2G4 905 aa16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 THAP10Q9P2Z0 257 aaPredicted RBP16.96■□□□□ 0.3
PCDHGC3-205ENST00000617641 PABPN1LA6NDY0 278 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 LSM1O15116 133 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 ANGPT2O15123 496 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 NVLO15381 856 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 ATG13O75143 517 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 PSMC3P17980 439 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 CYP2A7P20853 494 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZFP36L2P47974 494 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 PRLHRP49683 370 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 ABRQ12979 859 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 TAF11Q15544 211 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 HACD2Q6Y1H2 254 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 NEK10Q6ZWH5 1172 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 ERN2Q76MJ5 926 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 PCYOX1LQ8NBM8 494 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 PYCR2Q96C36 320 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 RPP25Q9BUL9 199 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SPAG4Q9NPE6 437 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC52A3Q9NQ40 469 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 NDUFAF1Q9Y375 327 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 LRRC42Q9Y546 428 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 QSOX1O00391 747 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC16A5O15375 505 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 LZTS3O60299 673 aaPredicted RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 WDR47O94967 919 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 EBLN1P0CF75 366 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 GDI1P31150 447 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 WASP42768 502 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 MRPL19P49406 292 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 MUM1Q2TAK8 710 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 PTCHD3Q3KNS1 767 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 PDCD4Q53EL6 469 aaKnown RBP16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC44A4Q53GD3 710 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SGO1Q5FBB7 561 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 RAET1GQ6H3X3 334 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 CACUL1Q86Y37 369 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 MCOLN3Q8TDD5 553 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 FOXJ1Q92949 421 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SPDL1Q96EA4 605 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 CCM2Q9BSQ5 444 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 TRPS1Q9UHF7 1281 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZNHIT2Q9UHR6 403 aa16.95■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC22A3O75751 556 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 P2RY2P41231 377 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 IRX1P78414 480 aaPredicted RBP16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 AP5B1Q2VPB7 878 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 ATAT1Q5SQI0 421 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 LRRC70Q7Z2Q7 622 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 TCAIMQ8N3R3 496 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 BHLHE22Q8NFJ8 381 aaPredicted RBP16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 VPS33AQ96AX1 596 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 TMEM159Q96B96 161 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 ROPN1LQ96C74 230 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 CCL27Q9Y4X3 112 aa16.94■□□□□ 0.3
PCDHGC3-205ENST00000617641 C1QTNF3-AMACRE9PGA6 284 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 H3BNX3 289 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ACOT8O14734 319 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 IL12AP29459 219 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 GPR1P46091 355 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC6A12P48065 614 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC7A2P52569 658 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 CNTN1Q12860 1018 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 RCAN2Q14206 197 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 RFTN2Q52LD8 501 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 DSG4Q86SJ6 1040 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 RASGRP3Q8IV61 690 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ATG10Q9H0Y0 220 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ACTR8Q9H981 624 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 HEBP1Q9NRV9 189 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 TMEM181Q9P2C4 612 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZNF490Q9ULM2 529 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ASPDHA6ND91 283 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 PRORSD1PA6NEY8 169 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ARHGEF33A8MVX0 844 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 MANBAO00462 879 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 MAP3K7O43318 606 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 BCAS2O75934 225 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 CLDN9O95484 217 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 GSTM1P09488 218 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ITPKAP23677 461 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 SOX9P48436 509 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 HNMTP50135 292 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 KCNK10P57789 538 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 HMGCS1Q01581 520 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 GSTM4Q03013 218 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 EMX2Q04743 252 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 GRIK2Q13002 908 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 TMEM52BQ4KMG9 183 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 NEK5Q6P3R8 708 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZNF765Q7L2R6 523 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 DHDDSQ86SQ9 333 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 CHCHD4Q8N4Q1 142 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 DNAJC9Q8WXX5 260 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 OR2AG1Q9H205 316 aa16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 POLR3HQ9Y535 204 aaPredicted RBP16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 ZFC3H1O60293 1989 aaKnown RBP16.93■□□□□ 0.3
PCDHGC3-205ENST00000617641 SLC5A10A0PJK1 596 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms