RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 KCTD19Q17RG1 926 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 INO80DQ53TQ3 878 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 SLC45A4Q5BKX6 768 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ANKRD20A8PQ5CZ79 823 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 FREM2Q5SZK8 3169 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 NEK5Q6P3R8 708 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TMCO3Q6UWJ1 677 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 HSD11B1LQ7Z5J1 315 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TRIM74Q86UV6 250 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 IQCHQ86VS3 1027 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PHYKPLQ8IUZ5 450 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ATPAF2Q8N5M1 289 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PLD5Q8N7P1 536 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TC2NQ8N9U0 490 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 SLC35G2Q8TBE7 412 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 FAM71BQ8TC56 605 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 LMX1AQ8TE12 382 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 SHROOM3Q8TF72 1996 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TEKT4Q8WW24 435 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 FEM1CQ96JP0 617 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 HIST1H2AHQ96KK5 128 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 APOLD1Q96LR9 279 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 LENG8Q96PV6 779 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 HIST1H2AJQ99878 128 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 MGME1Q9BQP7 344 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 CEP295Q9C0D2 2601 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PITHD1Q9GZP4 211 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 C10orf88Q9H8K7 445 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ERVMER34-1Q9H9K5 563 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 NHEJ1Q9H9Q4 299 aaPredicted RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 FGF22Q9HCT0 170 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 MRPL47Q9HD33 250 aaKnown RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 CD84Q9UIB8 345 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 APOBEC2Q9Y235 224 aaKnown RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 ATP8A1Q9Y2Q0 1164 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PLEKHM1Q9Y4G2 1056 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TTLL3Q9Y4R7 772 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ZZEF1O43149 2961 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 ACACBO00763 2458 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 PCNX2A6NKB5 2137 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TDRD6O60522 2096 aaKnown RBP4.56□□□□□ -1.68
CUL3-216ENST00000617432 TRPM6Q9BX84 2022 aa4.56□□□□□ -1.68
CUL3-216ENST00000617432 TLDC2A0PJX2 215 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 LRRD1A4D1F6 860 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 WDR91A4D1P6 747 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 TRABD2BA6NFA1 517 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 DIRC3C9JPN6 131 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 MYO1FO00160 1098 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 KCNK1O00180 336 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 AKR1B10O60218 316 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 RECQL5O94762 991 aaPredicted RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 SOD1P00441 154 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 CSF2P04141 144 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 MMP2P08253 660 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 H2AFZP0C0S5 128 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 KRT10P13645 584 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 PECAM1P16284 738 aaPredicted RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 TSHRP16473 764 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 TGM2P21980 687 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 XPAP23025 273 aaPredicted RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 KDELR1P24390 212 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 SERPINA4P29622 427 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 HTR7P34969 479 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 GARSP41250 739 aaKnown RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 MMP13P45452 471 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 RABIFP47224 123 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 POLD2P49005 469 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 HCAR3P49019 387 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ARRB1P49407 418 aaPredicted RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 PDX1P52945 283 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 BCL2L1Q07817 233 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 TARDBPQ13148 414 aaKnown RBP eCLIP4.55□□□□□ -1.68
CUL3-216ENST00000617432 SGCGQ13326 291 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 GALNT3Q14435 633 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ZNF235Q14590 738 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ZNF169Q14929 603 aaPredicted RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 PAFAH1B3Q15102 231 aaKnown RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 NOMO1Q15155 1222 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 SMAD1Q15797 465 aaKnown RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 CCDC181Q5TID7 509 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ZCCHC8Q6NZY4 707 aaKnown RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 AADACL2Q6P093 401 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ENPP7Q6UWV6 458 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 RAD9BQ6WBX8 426 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 H2AFVQ71UI9 128 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 DPPA4Q7L190 304 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 EFL1Q7Z2Z2 1120 aaKnown RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 PARGQ86W56 976 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 PSTKQ8IV42 348 aaKnown RBP4.55□□□□□ -1.68
CUL3-216ENST00000617432 SLC35F3Q8IY50 421 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 CNTD1Q8N815 330 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ACRBPQ8NEB7 543 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 DENND6BQ8NEG7 585 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 OR8K1Q8NGG5 319 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 OR4C6Q8NH72 309 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ARRDC2Q8TBH0 407 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 IFI44Q8TCB0 444 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 PIH1D2Q8WWB5 315 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 CASKIN2Q8WXE0 1202 aa4.55□□□□□ -1.68
CUL3-216ENST00000617432 ASB10Q8WXI3 467 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms