RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 HM13Q8TCT9 377 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FAM172AQ8WUF8 416 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 LRTOMTQ8WZ04 291 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 WNT8BQ93098 351 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 GPER1Q99527 375 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZIM2Q9NZV7 527 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ZNF223Q9UK11 482 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 ENO3P13929 434 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 APLNRP35414 380 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 NKPD1Q17RQ9 610 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RNF111Q6ZNA4 994 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 RNF168Q8IYW5 571 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 ADAMTS15Q8TE58 950 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TCEAL3Q969E4 200 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 FCRL2Q96LA5 508 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 KLHL32Q96NJ5 620 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ACO2Q99798 780 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 DHRS4Q9BTZ2 278 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 ELL3Q9HB65 397 aaPredicted RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 EIF2B4Q9UI10 523 aaKnown RBP3.3□□□□□ -1.88
LPP-220ENST00000617246 SIK3Q9Y2K2 1263 aa3.3□□□□□ -1.88
LPP-220ENST00000617246 TRIM3O75382 744 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 KRT75O95678 551 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PPIBP23284 216 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 SERPINH1P50454 418 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 GTF2A1P52655 376 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 RACK1P63244 317 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 DLX2Q07687 328 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 KLC1Q07866 573 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CRB2Q5IJ48 1285 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 POTEHQ6S545 545 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 C6orf15Q6UXA7 325 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 COX18Q8N8Q8 333 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CNEP1R1Q8N9A8 125 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NPAS2Q99743 824 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 RHNO1Q9BSD3 238 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 C10orf88Q9H8K7 445 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ATP8A1Q9Y2Q0 1164 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ZFC3H1O60293 1989 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 PRR23D1E9PI22 279 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 KHDRBS3O75525 346 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 PRR23D2P0DMB1 279 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 TTKP33981 857 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 FNTBP49356 437 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 TAF10Q12962 218 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 BCORP1Q8N888 145 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 EFHD2Q96C19 240 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 WRAP53Q9BUR4 548 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 DDX18Q9NVP1 670 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 MGAT4AQ9UM21 535 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CCDC88CQ9P219 2028 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ADAMTS3O15072 1205 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ARPC2O15144 300 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PRAMEF12O95522 483 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GSRP00390 522 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ITGB2P05107 769 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MAGEA12P43365 314 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MYBPC1Q00872 1141 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ZNF92Q03936 586 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ATP1A4Q13733 1029 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 DRICH1Q6PGQ1 229 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 HPS1Q92902 700 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 COG8Q96MW5 612 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MAGEH1Q9H213 219 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 LIPCP11150 499 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 NPPBP16860 134 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 OR4D2P58180 307 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MEP1AQ16819 746 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PRRT3Q5FWE3 981 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 IDNKQ5T6J7 187 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 DPY19L3Q6ZPD9 716 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ULK2Q8IYT8 1036 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 OR1J2Q8NGS2 313 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 DDIT4LQ96D03 193 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SNF8Q96H20 258 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 A0A0U1RQF3 1178 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PIP5K1BO14986 540 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CYTH3O43739 400 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 WBP4O75554 376 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 CDC25BP30305 580 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ART3Q13508 389 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SLC39A14Q15043 492 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 GPAT4Q86UL3 456 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ZNF418Q8TF45 676 aaPredicted RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 ZNF607Q96SK3 696 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ASPNQ9BXN1 380 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ANKZF1Q9H8Y5 726 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PSMD13Q9UNM6 376 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 DHDHQ9UQ10 334 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 PTRH2Q9Y3E5 179 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 MYL2P10916 166 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CLCNKBP51801 687 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MLF1P58340 268 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 CLRN1P58418 232 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 ESRRGP62508 458 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 POU5F1Q01860 360 aaKnown RBP3.29□□□□□ -1.88
LPP-220ENST00000617246 GPAT2Q6NUI2 795 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 MAMDC4Q6UXC1 1216 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 SGMS1Q86VZ5 419 aa3.29□□□□□ -1.88
LPP-220ENST00000617246 FADS6Q8N9I5 356 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms