RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 NKD1Q969G9 470 aa15.03■□□□□ -0
SRGAP2C-205ENST00000617209 ZNF669Q96BR6 464 aaPredicted RBP15.03■□□□□ -0
SRGAP2C-205ENST00000617209 STAMBPL1Q96FJ0 436 aa15.03■□□□□ -0
SRGAP2C-205ENST00000617209 FCRL4Q96PJ5 515 aa15.03■□□□□ -0
SRGAP2C-205ENST00000617209 MAP3K3Q99759 626 aa15.03■□□□□ -0
SRGAP2C-205ENST00000617209 TRIM56Q9BRZ2 755 aaKnown RBP15.03■□□□□ -0
SRGAP2C-205ENST00000617209 C1GALT1Q9NS00 363 aa15.03■□□□□ -0
SRGAP2C-205ENST00000617209 POMT2Q9UKY4 750 aa15.03■□□□□ -0
SRGAP2C-205ENST00000617209 TMEM184BQ9Y519 407 aaPredicted RBP15.03■□□□□ -0
SRGAP2C-205ENST00000617209 UBA6A0AVT1 1052 aaPredicted RBP15.02■□□□□ -0
SRGAP2C-205ENST00000617209 K7ENP7 123 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 EFSO43281 561 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 KDM1AO60341 852 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 ZBTB11O95625 1053 aaPredicted RBP15.02■□□□□ -0
SRGAP2C-205ENST00000617209 TTC4O95801 387 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 TPBGLP0DKB5 382 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 ITGB6P18564 788 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 CASQ1P31415 396 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 SHMT2P34897 504 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 HSD11B2P80365 405 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 PRKG2Q13237 762 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 THOC5Q13769 683 aaKnown RBP15.02■□□□□ -0
SRGAP2C-205ENST00000617209 TMED2Q15363 201 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 LONRF1Q17RB8 773 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 HIBCHQ6NVY1 386 aaPredicted RBP15.02■□□□□ -0
SRGAP2C-205ENST00000617209 INO80CQ6PI98 192 aaPredicted RBP15.02■□□□□ -0
SRGAP2C-205ENST00000617209 UNC5DQ6UXZ4 953 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 NAPRTQ6XQN6 538 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 CCDC81Q6ZN84 652 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 GPR155Q7Z3F1 870 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 VRK3Q8IV63 474 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 ADGRF3Q8IZF5 1079 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 KRT222Q8N1A0 295 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 OR5AR1Q8NGP9 310 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 LKAAEAR1Q8TD35 194 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 CALML6Q8TD86 181 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 CRELD1Q96HD1 420 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 EBNA1BP2Q99848 306 aaKnown RBP15.02■□□□□ -0
SRGAP2C-205ENST00000617209 PITPNM3Q9BZ71 974 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 APMAPQ9HDC9 416 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 OR6C2Q9NZP2 312 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 MAD1L1Q9Y6D9 718 aa15.02■□□□□ -0
SRGAP2C-205ENST00000617209 TEX51A0A1B0GUA7 166 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 BTN3A3O00478 584 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 TTI1O43156 1089 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 RPN2P04844 631 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 MSL3P1P0C860 447 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 PKMP14618 531 aaKnown RBP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 PGAM1P18669 254 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 POLR2CP19387 275 aaPredicted RBP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 PRDX3P30048 256 aaKnown RBP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 FMO4P31512 558 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 KPNA2P52292 529 aaKnown RBP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 EIF3BP55884 814 aaKnown RBP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 SH3BP2P78314 561 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 ACY1Q03154 408 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 FOXM1Q08050 763 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 MAP7Q14244 749 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 CTSL3PQ5NE16 218 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 OTOAQ7RTW8 1153 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 PDIK1LQ8N165 341 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 D2HGDHQ8N465 521 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 OTUD6BQ8N6M0 293 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 SPATA4Q8NEY3 305 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 LRRC39Q96DD0 335 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 OR6C1Q96RD1 312 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 CTRCQ99895 268 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 HGH1Q9BTY7 390 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 KLHL42Q9P2K6 505 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 BTRCQ9Y297 605 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 CRYL1Q9Y2S2 319 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 MRFAP1Q9Y605 127 aa15.01□□□□□ -0.01
SRGAP2C-205ENST00000617209 C2orf74A8MZ97 194 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 BTN3A1O00481 513 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 NDC80O14777 642 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 TP73O15350 636 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 STK17BO94768 372 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 SEC31AO94979 1220 aaKnown RBP15□□□□□ -0.01
SRGAP2C-205ENST00000617209 MAP4P27816 1152 aaKnown RBP15□□□□□ -0.01
SRGAP2C-205ENST00000617209 ATP5DP30049 168 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 ARL4DP49703 201 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 ATP1A2P50993 1020 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 CXADRP78310 365 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 DHX9Q08211 1270 aaKnown RBP15□□□□□ -0.01
SRGAP2C-205ENST00000617209 GBX1Q14549 363 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 KYNUQ16719 465 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 MSS51Q4VC12 460 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 SPANXN3Q5MJ09 141 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 MANEAQ5SRI9 462 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 TMTC4Q5T4D3 741 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 ZNF470Q6ECI4 717 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 UNC5AQ6ZN44 842 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 MAATS1Q7Z4T9 603 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 PPP1R3BQ86XI6 285 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 C17orf53Q8N3J3 647 aaPredicted RBP15□□□□□ -0.01
SRGAP2C-205ENST00000617209 SIDT2Q8NBJ9 832 aaKnown RBP15□□□□□ -0.01
SRGAP2C-205ENST00000617209 OR8K5Q8NH50 307 aa15□□□□□ -0.01
SRGAP2C-205ENST00000617209 SNF8Q96H20 258 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms