RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ZNF268Q14587 947 aaPredicted RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 C6orf141Q5SZD1 244 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 PIGWQ7Z7B1 504 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 LRRC58Q96CX6 371 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ADAD1Q96M93 576 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 ZSWIM1Q9BR11 485 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 CDH20Q9HBT6 801 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 FBXL12Q9NXK8 326 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ATXN10Q9UBB4 475 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 GCH1P30793 250 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 GGT2P36268 569 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 RBM34P42696 430 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 MAGEA3P43357 314 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 RFX5P48382 616 aaPredicted RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 LRRC66Q68CR7 880 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 GSTCDQ8NEC7 633 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 ALG5Q9Y673 324 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 NLRP1Q9C000 1473 aa12.45□□□□□ -0.42
TCF4-248ENST00000616053 PCF11O94913 1555 aaKnown RBP12.45□□□□□ -0.42
TCF4-248ENST00000616053 FAM240BA0A1B0GVZ2 78 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 POP4O95707 220 aaKnown RBP12.44□□□□□ -0.42
TCF4-248ENST00000616053 TFEBP19484 476 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 MPIP34949 423 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 CIDECQ96AQ7 238 aaPredicted RBP12.44□□□□□ -0.42
TCF4-248ENST00000616053 J3QRK9 145 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 CAMTA2O94983 1202 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 P04436 131 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ZNF12P17014 697 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 FSTL1Q12841 308 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ABHD17BQ5VST6 288 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ZDHHC12Q96GR4 267 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 TFECO14948 347 aaPredicted RBP12.44□□□□□ -0.42
TCF4-248ENST00000616053 LILRB5O75023 590 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 FKBP6O75344 327 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 TSPAN8P19075 237 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 EPHA4P54764 986 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 TLE2Q04725 743 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 PGM5Q15124 567 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 PTF1AQ7RTS3 328 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 SPPL2BQ8TCT7 592 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 MARK4Q96L34 752 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 DEFB126Q9BYW3 111 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 FOXN3O00409 490 aaPredicted RBP12.44□□□□□ -0.42
TCF4-248ENST00000616053 LINC00032P0C843 101 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 PTPN6P29350 595 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 KHKP50053 298 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ALX1Q15699 326 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ATPAF1Q5TC12 328 aaPredicted RBP12.44□□□□□ -0.42
TCF4-248ENST00000616053 CAMKVQ8NCB2 501 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 CDRT15Q96T59 188 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 MMADHCQ9H3L0 296 aaPredicted RBP12.44□□□□□ -0.42
TCF4-248ENST00000616053 THAP1Q9NVV9 213 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 MCL1Q07820 350 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 EXOC3L2Q2M3D2 409 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 CCDC116Q8IYX3 515 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 GOLM1Q8NBJ4 401 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 ACTL9Q8TC94 416 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 MON1BQ7L1V2 547 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 IRF7Q92985 503 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 WIF1Q9Y5W5 379 aa12.44□□□□□ -0.42
TCF4-248ENST00000616053 GGT3PA6NGU5 568 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ACP5P13686 325 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 PSMB4P28070 264 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 LIPEQ05469 1076 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 PARP6Q2NL67 630 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ZFP1Q6P2D0 407 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 KDM7AQ6ZMT4 941 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 PHOSPHO1Q8TCT1 267 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 PLSCR5A0PG75 271 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 NRIP1P48552 1158 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 MERTKQ12866 999 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 TTLL10Q6ZVT0 673 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 RHBDD1Q8TEB9 315 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 BATF3Q9NR55 127 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 FAM228BP0C875 321 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CBLBQ13191 982 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 NAB1Q13506 487 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 SGCAQ16586 387 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 S100A7AQ86SG5 101 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 SLC30A4O14863 429 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 PIGNO95427 931 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 ALPIP09923 528 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 GRIA3P42263 894 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CDK7P50613 346 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 SNU13P55769 128 aaKnown RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 IDNKQ5T6J7 187 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 TMEM214Q6NUQ4 689 aaKnown RBP12.43□□□□□ -0.42
TCF4-248ENST00000616053 SPATA22Q8NHS9 363 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 CLUHO75153 1309 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 FADS2P1A8MWK0 482 aa12.43□□□□□ -0.42
TCF4-248ENST00000616053 E5RJQ4 531 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms