RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 SFRP1Q8N474 314 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 AADATQ8N5Z0 425 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 NPWQ8N729 165 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 ZNF513Q8N8E2 541 aaPredicted RBP10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 ARL14EPQ8N8R7 260 aaPredicted RBP10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 SH3RF2Q8TEC5 729 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 PIGKQ92643 395 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 PEX13Q92968 403 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 C19orf60Q96EN9 201 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 SCNM1Q9BWG6 230 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 LIN28AQ9H9Z2 209 aaKnown RBP10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 RIC8BQ9NVN3 520 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 ARHGEF38Q9NXL2 777 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 WASF3Q9UPY6 502 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 ERGIC3Q9Y282 383 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 MYO16Q9Y6X6 1858 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 KIAA1549LQ6ZVL6 1849 aa10.9□□□□□ -0.66
RABGAP1-213ENST00000616002 A0A0J9YYE9 177 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 TCRBV5S2A0A599 114 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 C2orf78A6NCI8 922 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 C16orf96A6NNT2 1141 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 UBXN8O00124 270 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 KPNA4O00629 521 aaPredicted RBP10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CDX4O14627 284 aaPredicted RBP10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 ANGPT2O15123 496 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 MAGEB3O15480 346 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 SLC7A4O43246 635 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 TULP3O75386 442 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 KATNA1O75449 491 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 SUPT7LO94864 414 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 PRSS23O95084 383 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 HNRNPLP14866 589 aaKnown RBP eCLIP10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 TPH1P17752 444 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CD53P19397 219 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 BCKDHBP21953 392 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 HTR1EP28566 365 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 ABCG1P45844 678 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CDH15P55291 814 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 GABARAPL2P60520 117 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 HERVK_113P63132 956 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 GSTM4Q03013 218 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 LMAN2Q12907 356 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 NFATC3Q12968 1075 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 NME3Q13232 169 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CRY1Q16526 586 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 ESRP1Q6NXG1 681 aaKnown RBP10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 BLOC1S3Q6QNY0 202 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CYP2R1Q6VVX0 501 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CYHR1Q6ZMK1 362 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CLEC20AQ6ZU45 233 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 PAQR9Q6ZVX9 377 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 DENND6AQ8IWF6 608 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 SCN4BQ8IWT1 228 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 TP53INP2Q8IXH6 220 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 DEFB124Q8NES8 71 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 MDGA1Q8NFP4 955 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 RHEBL1Q8TAI7 183 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 HDAC10Q969S8 669 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 LRRC58Q96CX6 371 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 BDH2Q9BUT1 245 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 ERVK-6Q9BXR3 956 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 LINC00597Q9H2U6 94 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 POLR1BQ9H9Y6 1135 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 ATP13A1Q9HD20 1204 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 SLC52A3Q9NQ40 469 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 OR12D3Q9UGF7 316 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 PSME2Q9UL46 239 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 MMP17Q9ULZ9 603 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 CDC14AQ9UNH5 594 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 VWA7Q9Y334 891 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 BAHCC1Q9P281 2608 aa10.9□□□□□ -0.67
RABGAP1-213ENST00000616002 IGF2RP11717 2491 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 LAMA1P25391 3075 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 A0A1W2PP18 115 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 K7EQS6 105 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 FXYD1O00168 92 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 IFRD1O00458 451 aaPredicted RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 ZBTB11O95625 1053 aaPredicted RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 LDLRP01130 860 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 UGT1A6P19224 532 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 SAT1P21673 171 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 UGT1A1P22309 533 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 UGT1A4P22310 534 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 SLC6A2P23975 617 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 GSTM2P28161 218 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 PCSK1P29120 753 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 UGT1A3P35503 534 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 UGT1A5P35504 534 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 OPRD1P41143 372 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 LHX1P48742 406 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 ATXN3P54252 364 aaPredicted RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 PITX1P78337 314 aaPredicted RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 PRAMEP78395 509 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 NRG1Q02297 640 aaPredicted RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 CTBP1Q13363 440 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 TOP3AQ13472 1001 aaPredicted RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 RGS21Q2M5E4 152 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 TRIM61Q5EBN2 209 aa10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 AARS2Q5JTZ9 985 aaKnown RBP10.89□□□□□ -0.67
RABGAP1-213ENST00000616002 BROXQ5VW32 411 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms