RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.86□□□□□ -0.35
FOXN3-219ENST00000615335 STYXQ8WUJ0 223 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 DUS3LQ96G46 650 aaKnown RBP12.86□□□□□ -0.35
FOXN3-219ENST00000615335 MAGED4Q96JG8 741 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ABCB8Q9NUT2 735 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 MARK1Q9P0L2 795 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 KLQ9UEF7 1012 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 TCAF1Q9Y4C2 921 aa12.86□□□□□ -0.35
FOXN3-219ENST00000615335 ECI2O75521 394 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 SEC14L2O76054 403 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 SLC35E2BP0CK96 405 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 C7P10643 843 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 CD70P32970 193 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 GRIA3P42263 894 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 NKX2-5P52952 324 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-219ENST00000615335 PGGT1BP53609 377 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 RAD23AP54725 363 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 IL10RBQ08334 325 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 LMAN2Q12907 356 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 UGP2Q16851 508 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 PCID2Q5JVF3 399 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 LRRC8EQ6NSJ5 796 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 FSTL5Q8N475 847 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-219ENST00000615335 STON2Q8WXE9 905 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 RCN3Q96D15 328 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 TRMT61BQ9BVS5 477 aaKnown RBP12.85□□□□□ -0.35
FOXN3-219ENST00000615335 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 ACOT9Q9Y305 439 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 COL6A3P12111 3177 aa12.85□□□□□ -0.35
FOXN3-219ENST00000615335 OTOL1A6NHN0 477 aaPredicted RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 KDELR3O43731 214 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 AHSGP02765 367 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 GSNP06396 782 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 HLA-FP30511 346 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 GDI1P31150 447 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 RRM2P31350 389 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 MLLT10P55197 1068 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 CEACAM7Q14002 265 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 CCNJQ5T5M9 372 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 PKN3Q6P5Z2 889 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 SLC22A16Q86VW1 577 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 ZCCHC7Q8N3Z6 543 aaKnown RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 CNTD1Q8N815 330 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 SEMA6AQ9H2E6 1030 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 ZNF385DQ9H6B1 395 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 ZNF304Q9HCX3 659 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 RBM22Q9NW64 420 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■□□□ 11.4
FOXN3-219ENST00000615335 AAR2Q9Y312 384 aaKnown RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 PCDHGA8Q9Y5G5 932 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 C2CD4DB7Z1M9 353 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 TRIM38O00635 465 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 AURKAO14965 403 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 CFLARO15519 480 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 DLX3O60479 287 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 HLCSP50747 726 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 RENBPP51606 427 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 SLC10A7Q0GE19 358 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 NDUFAF5Q5TEU4 345 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 MARC1Q5VT66 337 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 TMEM198Q66K66 360 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 ZCCHC8Q6NZY4 707 aaKnown RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 CAMK1DQ8IU85 385 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 CENPLQ8N0S6 344 aaPredicted RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 ZNF557Q8N988 423 aaPredicted RBP12.84□□□□□ -0.35
FOXN3-219ENST00000615335 LRTOMTQ8WZ04 291 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 ASB9Q96DX5 294 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 PSKH2Q96QS6 385 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 TBL1YQ9BQ87 522 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 SLA2Q9H6Q3 261 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 HPS4Q9NQG7 708 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 GTSE1Q9NYZ3 720 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 OR51B4Q9Y5P0 310 aa12.84□□□□□ -0.35
FOXN3-219ENST00000615335 TARM1B6A8C7 271 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 ENO3P13929 434 aaPredicted RBP12.83□□□□□ -0.35
FOXN3-219ENST00000615335 MATN1P21941 496 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 SLC7A1P30825 629 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 CASP3P42574 277 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 POLD2P49005 469 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 RHDQ02161 417 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 ART3Q13508 389 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 CDK10Q15131 360 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 DUSP7Q16829 419 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 NEK5Q6P3R8 708 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 BTLAQ7Z6A9 289 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.35
FOXN3-219ENST00000615335 SPATA22Q8NHS9 363 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 ATP6V1E2Q96A05 226 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 ALG14Q96F25 216 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 CIB1Q99828 191 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 IL20Q9NYY1 176 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 PKD2L2Q9NZM6 624 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 XPR1Q9UBH6 696 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 SNX13Q9Y5W8 968 aa12.83□□□□□ -0.35
FOXN3-219ENST00000615335 ACTL7AQ9Y615 435 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms