RNA–Protein interactions for RNA: ENST00000614337.4

KNL1-213, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 3,211 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-213ENST00000614337 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 CYTH4Q9UIA0 394 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 COPS3Q9UNS2 423 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 PRELID3BQ9Y3B1 194 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 SBF1O95248 1867 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 HMX2A2RU54 273 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 AQP12BA6NM10 295 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 F8W036 122 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 B4GALT3O60512 393 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TRIM13O60858 407 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 GPR32O75388 356 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 SLC22A5O76082 557 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 PGLSO95336 258 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TBX18O95935 607 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 APOC1P02654 83 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 MT-ND1P03886 318 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 USP17L7P0C7H9 530 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 HOXB3P14651 431 aaPredicted RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 PDGFRAP16234 1089 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 ZNF3P17036 446 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TFEBP19484 476 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 SCN4AP35499 1836 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TGFBR1P36897 503 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 CYP4F2P78329 520 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 MRPS6P82932 125 aaKnown RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 RBP5P82980 135 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 EMX1Q04741 257 aaPredicted RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 CYP4F3Q08477 520 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 ACOX1Q15067 660 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 EML3Q32P44 896 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 FBXO47Q5MNV8 452 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 VARS2Q5ST30 1063 aaKnown RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 IRAK1BP1Q5VVH5 260 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TXNDC11Q6PKC3 985 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.86□□□□□ -1.31
KNL1-213ENST00000614337 TIFABQ6ZNK6 161 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TMEM173Q86WV6 379 aaPredicted RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 AQP12AQ8IXF9 295 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 CCDC36Q8IYA8 594 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 TMEM199Q8N511 208 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 OR4M2Q8NGB6 313 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 OR8K5Q8NH50 307 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 RPL3LQ92901 407 aaKnown RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 SENP8Q96LD8 212 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 SPATA9Q9BWV2 254 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 PAPPA2Q9BXP8 1791 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 KAT8Q9H7Z6 458 aaKnown RBP6.86□□□□□ -1.31
KNL1-213ENST00000614337 IL1RL2Q9HB29 575 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 LRRC4Q9HBW1 653 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 CACNA2D2Q9NY47 1150 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 REV1Q9UBZ9 1251 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 GTF2IRD1Q9UHL9 959 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 RAPGEFL1Q9UHV5 662 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 ACTL7AQ9Y615 435 aa6.86□□□□□ -1.31
KNL1-213ENST00000614337 MUC3AQ02505 3323 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ATG2BQ96BY7 2078 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PHIPQ8WWQ0 1821 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 A0A1W2PQ45 241 aaPredicted RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 A0A1W2PQY0 241 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ARL5CA6NH57 179 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 H0YCG3 227 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 AGRPO00253 132 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 DFFAO00273 331 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 MICAL2O94851 1124 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 THP07101 528 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 CHRNGP07510 517 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ADORA3P0DMS8 318 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 CSF2RAP15509 400 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 GJA1P17302 382 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 MAOBP27338 520 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PSMD8P48556 350 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 DGKQP52824 942 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PTPN11Q06124 597 aaPredicted RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 RIN1Q13671 783 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ARMCX4Q5H9R4 360 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PPM1JQ5JR12 505 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PIK3R6Q5UE93 754 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 FAM171A1Q5VUB5 890 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 REP15Q6BDI9 236 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 DARS2Q6PI48 645 aaKnown RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 PRSS55Q6UWB4 352 aaPredicted RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 PRSS48Q7RTY5 328 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PYROXD2Q8N2H3 581 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ZNF366Q8N895 744 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ZNF557Q8N988 423 aaPredicted RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 DNAJA4Q8WW22 397 aaPredicted RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 MLPHQ9BV36 600 aaPredicted RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 ZNF518BQ9C0D4 1074 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
KNL1-213ENST00000614337 ACSS2Q9NR19 701 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ZNF358Q9NW07 568 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 ERVK13-1Q9NX77 482 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 SLC23A1Q9UHI7 598 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 TNFSF13BQ9Y275 285 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 RAP2CQ9Y3L5 183 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 PSAT1Q9Y617 370 aa6.85□□□□□ -1.31
KNL1-213ENST00000614337 RRN3P2A6NIE6 340 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms