RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 PLEKHA1Q9HB21 404 aa19.84■□□□□ 0.77
CTDP1-208ENST00000613122 GDAP2Q9NXN4 497 aa19.84■□□□□ 0.77
CTDP1-208ENST00000613122 SCELO95171 688 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 NR1H2P55055 460 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 B3GNT6Q6ZMB0 384 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 TMEM110Q86TL2 294 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 NUDT13Q86X67 352 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 ZNF384Q8TF68 577 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 MTERF1Q99551 399 aaKnown RBP19.83■□□□□ 0.77
CTDP1-208ENST00000613122 RAD9AQ99638 391 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 PLGRKTQ9HBL7 147 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 C8orf4Q9NR00 106 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 SLC2A4RGQ9NR83 387 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 MCUBQ9NWR8 336 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 ZNF282Q9UDV7 671 aaPredicted RBP19.83■□□□□ 0.77
CTDP1-208ENST00000613122 CICQ96RK0 1608 aaPredicted RBP19.83■□□□□ 0.77
CTDP1-208ENST00000613122 DNASE1L1P49184 302 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 CLCNKAP51800 687 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 FOLH1Q04609 750 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 LYSMD3Q7Z3D4 306 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 KCT2Q8NC54 265 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 SIX2Q9NPC8 291 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 IFT80Q9P2H3 777 aaPredicted RBP19.83■□□□□ 0.77
CTDP1-208ENST00000613122 AP4B1Q9Y6B7 739 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 IFT172Q9UG01 1749 aa19.83■□□□□ 0.77
CTDP1-208ENST00000613122 C2orf71A6NGG8 1288 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 PRKCHP24723 683 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 OLR1P78380 273 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 AAK1Q2M2I8 961 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 PRAMEF14Q5SWL7 426 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 PRAMEF13Q5VWM6 474 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 LMX1AQ8TE12 382 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 CLK4Q9HAZ1 481 aaKnown RBP19.83■□□□□ 0.76
CTDP1-208ENST00000613122 IL1RAPQ9NPH3 570 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 GNEQ9Y223 722 aaKnown RBP19.83■□□□□ 0.76
CTDP1-208ENST00000613122 METTL18O95568 372 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 ZNF30P17039 623 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 TGFBR2P37173 567 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 ZNF846Q147U1 533 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 VWA5B1Q5TIE3 1220 aa19.83■□□□□ 0.76
CTDP1-208ENST00000613122 MTMR11A4FU01 709 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 LEFTY2O00292 366 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 SAP18O00422 153 aaKnown RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 PCDH7O60245 1069 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ITGADQ13349 1161 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 HKDC1Q2TB90 917 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 CAMKVQ8NCB2 501 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 NDC1Q9BTX1 674 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 NMUR2Q9GZQ4 415 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 PIGUQ9H490 435 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ALG2Q9H553 416 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ADAMDEC1O15204 470 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 MMP20O60882 483 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 CHRNA6Q15825 494 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 SIRPB2Q5JXA9 342 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 NCBP2-AS2Q69YL0 99 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 EFHD2Q96C19 240 aaPredicted RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 C1GALT1C1Q96EU7 318 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 EBF3Q9H4W6 596 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 RPL26L1Q9UNX3 145 aaKnown RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ACVRL1P37023 503 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 SLBPQ14493 270 aaKnown RBP eCLIP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 SGCBQ16585 318 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 PARP8Q8N3A8 854 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 GLB1L3Q8NCI6 653 aaPredicted RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 CCDC182A6NF36 153 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ATP1B2P14415 290 aaPredicted RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 RIPK1Q13546 671 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 DGAT2Q96PD7 388 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ADAP2Q9NPF8 381 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 TTC24A2A3L6 582 aaPredicted RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 PLGP00747 810 aaPredicted RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ALPPP05187 535 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 PLGLB1Q02325 96 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 TRAP1Q12931 704 aaKnown RBP19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ITPRIPL2Q3MIP1 535 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 PAOXQ6QHF9 649 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 RNF19BQ6ZMZ0 732 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 ADGRG6Q86SQ4 1221 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 COX4I2Q96KJ9 171 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 EFCAB11Q9BUY7 163 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 DUSP26Q9BV47 211 aa19.82■□□□□ 0.76
CTDP1-208ENST00000613122 OR51F1A6NGY5 319 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 PRODHO43272 600 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 MTX2O75431 263 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 CCNB2O95067 398 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 ADH1BP00325 375 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 AHCYP23526 432 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 PGAM4Q8N0Y7 254 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 ZNF781Q8N8C0 355 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 KAT2AQ92830 837 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 SNAI1O95863 264 aaPredicted RBP19.81■□□□□ 0.76
CTDP1-208ENST00000613122 FRRS1Q6ZNA5 592 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 GATA5Q9BWX5 397 aaPredicted RBP19.81■□□□□ 0.76
CTDP1-208ENST00000613122 DSN1Q9H410 356 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 SNX7Q9UNH6 387 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 A0A0J9YVX5 310 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 PRORSD1PA6NEY8 169 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 ZNF823P16415 610 aa19.81■□□□□ 0.76
CTDP1-208ENST00000613122 EFNA1P20827 205 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms