RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 B4GAT1O43505 415 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 C8AP07357 584 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 C1SP09871 688 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 ITPKAP23677 461 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 TACR1P25103 407 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 CALRP27797 417 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 SLC5A2P31639 672 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 PHC1P78364 1004 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 MERTKQ12866 999 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 EFL1Q7Z2Z2 1120 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 PTRH1Q86Y79 214 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 MSRB3Q8IXL7 192 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 LMNTD1Q8N9Z9 388 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 THUMPD3Q9BV44 507 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 RC3H2Q9HBD1 1191 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 B4GALT6Q9UBX8 382 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 TNPO3Q9Y5L0 923 aaKnown RBP13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 PLXNB3Q9ULL4 1909 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 CHD9Q3L8U1 2897 aa13.79□□□□□ -0.2
PCDHGA3-202ENST00000612467 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 LRG1P02750 347 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 RPS3P23396 243 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 FOXM1Q08050 763 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 IMPG1Q17R60 797 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKRD33Q7Z3H0 272 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 CYB5D2Q8WUJ1 264 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ACDQ96AP0 544 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ULK4Q96C45 1275 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 EGLN2Q96KS0 407 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF583Q96ND8 569 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 YME1L1Q96TA2 773 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 HPS4Q9NQG7 708 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 KIAA1522Q9P206 1035 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 THEGQ9P2T0 379 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMEM202A6NGA9 273 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 K7EPI3 171 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ULK1O75385 1050 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 FGF18O76093 207 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 PDYNP01213 254 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ENO2P09104 434 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 EFNA1P20827 205 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 RPIAP49247 311 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 C22orf39Q6P5X5 142 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 LILRA3Q8N6C8 439 aaPredicted RBP13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 FIBINQ8TAL6 211 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 NSMCE2Q96MF7 247 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 TSSK3Q96PN8 268 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 BBS2Q9BXC9 721 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 ACPTQ9BZG2 426 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 SUV39H2Q9H5I1 410 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 NTN4Q9HB63 628 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 TBX21Q9UL17 535 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 OGDHLQ9ULD0 1010 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 COMMD3-BMI1R4GMX3 469 aa13.78□□□□□ -0.2
PCDHGA3-202ENST00000612467 MANBAO00462 879 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 EEFSECP57772 596 aaKnown RBP13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 WDR5P61964 334 aaKnown RBP13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 MPPE1Q53F39 396 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 HTR3DQ70Z44 454 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZFAND2BQ8WV99 257 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 SLC13A3Q8WWT9 602 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 GTF2H4Q92759 462 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 INPP5KQ9BT40 448 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 ACTR8Q9H981 624 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 PNPLA3Q9NST1 481 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 DENND4CQ5VZ89 1909 aa13.77□□□□□ -0.2
PCDHGA3-202ENST00000612467 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR2AG2A6NM03 316 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 HIDE1A8MVS5 230 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 STK16O75716 305 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 EPB42P16452 691 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 PPP3CCP48454 512 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 NTHL1P78549 312 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 CTBSQ01459 385 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 ILF2Q12905 390 aaKnown RBP13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 ADNP2Q6IQ32 1131 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 NEK5Q6P3R8 708 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 TTC33Q6PID6 262 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 MACC1Q6ZN28 852 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 UBE2R2Q712K3 238 aaPredicted RBP13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 SCRN2Q96FV2 425 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 COPS8Q99627 209 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 HTATIP2Q9BUP3 242 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 DPY30Q9C005 99 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 BRD9Q9H8M2 597 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 HSFX1Q9UBD0 423 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 LILRB3O75022 631 aa13.77□□□□□ -0.21
PCDHGA3-202ENST00000612467 GPIP06744 558 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms