RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 OR1D2P34982 312 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 HSPA14Q0VDF9 509 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 PWP1Q13610 501 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 TRIM16LQ309B1 348 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 TXNDC11Q6PKC3 985 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 GALNT7Q86SF2 657 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 RIMKLAQ8IXN7 391 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 CHDHQ8NE62 594 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-207ENST00000612273 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 GTF2H4Q92759 462 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 NUSAP1Q9BXS6 441 aaKnown RBP13.78□□□□□ -0.2
COL6A1-207ENST00000612273 PARVBQ9HBI1 364 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 EIF3LQ9Y262 564 aaKnown RBP13.78□□□□□ -0.2
COL6A1-207ENST00000612273 RBMX2Q9Y388 322 aaKnown RBP13.78□□□□□ -0.2
COL6A1-207ENST00000612273 FUOMA2VDF0 154 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-207ENST00000612273 MTX2O75431 263 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 FKBP9O95302 570 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 HTR1AP08908 422 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-207ENST00000612273 CA8P35219 290 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 MAPKAPK2P49137 400 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 RAPSNQ13702 412 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 PAGE2BQ5JRK9 111 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 CES5AQ6NT32 575 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 SBSNQ6UWP8 590 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 IGFN1Q86VF2 1251 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 RNF38Q9H0F5 515 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 DNMT3LQ9UJW3 386 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 FBXO10Q9UK96 956 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 DLGAP4Q9Y2H0 992 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 SH3GLB1Q9Y371 365 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 GMEB1Q9Y692 573 aa13.78□□□□□ -0.2
COL6A1-207ENST00000612273 TYW5A2RUC4 315 aaKnown RBP13.77□□□□□ -0.2
COL6A1-207ENST00000612273 COCHO43405 550 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 FADS2O95864 444 aaKnown RBP13.77□□□□□ -0.2
COL6A1-207ENST00000612273 IDUAP35475 653 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 TSTA3Q13630 321 aaPredicted RBP13.77□□□□□ -0.2
COL6A1-207ENST00000612273 CST9Q5W186 159 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 USP51Q70EK9 711 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 FUBP3Q96I24 572 aaKnown RBP eCLIP13.77□□□□□ -0.2
COL6A1-207ENST00000612273 UROC1Q96N76 676 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 DPH2Q9BQC3 489 aaPredicted RBP13.77□□□□□ -0.2
COL6A1-207ENST00000612273 MAGEH1Q9H213 219 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 PAK1IP1Q9NWT1 392 aaPredicted RBP13.77□□□□□ -0.2
COL6A1-207ENST00000612273 CRLS1Q9UJA2 301 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 PSME2Q9UL46 239 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 PCDHB14Q9Y5E9 798 aa13.77□□□□□ -0.2
COL6A1-207ENST00000612273 LOC100130705A0A1B0GUX0 176 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 RAD51BO15315 384 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 SMAD6O43541 496 aaKnown RBP13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ABCB7O75027 752 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 OTCP00480 354 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 CLCN7P51798 805 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ARF5P84085 180 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 TRAF3Q13114 568 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 PLD1Q13393 1074 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 PON2Q15165 354 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 DPY19L1Q2PZI1 675 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 MFSD14CQ5VZR4 134 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 RFLNAQ6ZTI6 216 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ITFG2Q969R8 447 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 UGT2B28Q9BY64 529 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 MIR1-1HGQ9H1L0 117 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 POPDC3Q9HBV1 291 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ERVK-18Q9QC07 812 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF451Q9Y4E5 1061 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 SLC38A8A6NNN8 435 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 TAPBPO15533 448 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 TBL1XO60907 577 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ITPKAP23677 461 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 CDKN2CP42773 168 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 PRKCZQ05513 592 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 VTCN1Q7Z7D3 282 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 SLCO6A1Q86UG4 719 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 KCNJ9Q92806 393 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 RPL3LQ92901 407 aaKnown RBP13.77□□□□□ -0.21
COL6A1-207ENST00000612273 NODALQ96S42 347 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 MBOAT4Q96T53 435 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ATG10Q9H0Y0 220 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 LRTM1Q9HBL6 345 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 OLA1Q9NTK5 396 aaKnown RBP13.77□□□□□ -0.21
COL6A1-207ENST00000612273 VNN3Q9NY84 501 aa13.77□□□□□ -0.21
COL6A1-207ENST00000612273 ARIH1Q9Y4X5 557 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-207ENST00000612273 CPSF4O95639 269 aaKnown RBP13.76□□□□□ -0.21
COL6A1-207ENST00000612273 NTRK1P04629 796 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ALDH2P05091 517 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 CKBP12277 381 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 ANGPTL8Q6UXH0 198 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 PRR23BQ6ZRT6 265 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 LRRC8DQ7L1W4 858 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 MSRB3Q8IXL7 192 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 KLHL23Q8NBE8 558 aa13.76□□□□□ -0.21
COL6A1-207ENST00000612273 NDNFQ8TB73 568 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms