RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	ZHX1-C8orf76	Q96EF9	292 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	LINGO1	Q96FE5	620 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	CDK15	Q96Q40	435 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	ABHD16B	Q9H3Z7	469 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	IKZF5	Q9H5V7	419 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	SIAE	Q9HAT2	523 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	SLC25A37	Q9NYZ2	338 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	FBXO10	Q9UK96	956 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	EIF3L	Q9Y262	564 aa	Known RBP	13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	INVS	Q9Y283	1065 aa		13.49	□□□□□ -0.25
UBE2F-223	ENST00000612130	PTPRD	P23468	1912 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SNPH	O15079	494 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	RAMP2	O60895	175 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	FADS2	O95864	444 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	FSHR	P23945	695 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PSMA3	P25788	255 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	TGFBR2	P37173	567 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SERINC3	Q13530	473 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	DGCR6	Q14129	220 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	UPP1	Q16831	310 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	LRIT3	Q3SXY7	679 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	RFTN2	Q52LD8	501 aa	Predicted RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	CPZ	Q66K79	652 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	RNF165	Q6ZSG1	346 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	DET1	Q7L5Y6	550 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	CALHM3	Q86XJ0	350 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PLPP6	Q8IY26	295 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	CARNMT1	Q8N4J0	409 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	CD200R1	Q8TD46	325 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ESAM	Q96AP7	390 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PYURF	Q96I23	114 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	TRIB3	Q96RU7	358 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	NMUR1	Q9HB89	426 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	TRBV5-3	A0A0A0MS03	114 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130		A0A1W2PQH9	124 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	OR2A25	A4D2G3	310 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	CASTOR2	A6NHX0	329 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	EFCAB9	A8MZ26	197 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ADM5	C9JUS6	153 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	TREH	O43280	583 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	DYRK3	O43781	588 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	OTC	P00480	354 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SERPINA1	P01009	418 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SERPINF2	P08697	491 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PIRT	P0C851	137 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ARL1	P40616	181 aa	Predicted RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	RPL38	P63173	70 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PLIN5	Q00G26	463 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PPP1R8	Q12972	351 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	3e-6	■■■■■ 30.2
UBE2F-223	ENST00000612130	FAM174B	Q3ZCQ3	159 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ZNF404	Q494X3	552 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SLX4IP	Q5VYV7	408 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ALG1L	Q6GMV1	187 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	GOLGA7	Q7Z5G4	137 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	MMAA	Q8IVH4	418 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	SIDT2	Q8NBJ9	832 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	OR4F6	Q8NGB9	312 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	OR10T2	Q8NGX3	314 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	FCGR1B	Q92637	280 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	TBCD	Q9BTW9	1192 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	RIBC2	Q9H4K1	309 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ABCB10	Q9NRK6	738 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	FAM105A	Q9NUU6	356 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	C1orf109	Q9NX04	203 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	ASIC5	Q9NY37	505 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	NUDT5	Q9UKK9	219 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	PKP3	Q9Y446	797 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	CCL27	Q9Y4X3	112 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	GMPPB	Q9Y5P6	360 aa		13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	POLR2A	P24928	1970 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-223	ENST00000612130	AGAP5	A6NIR3	686 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	METTL15	A6NJ78	407 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	OR7A17	O14581	309 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	MUSK	O15146	869 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	PRAMEF11	O60813	436 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	MITF	O75030	526 aa	Predicted RBP	13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	GJB3	O75712	270 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	ZBTB7A	O95365	584 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	CD36	P16671	472 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	CLK3	P49761	638 aa	Known RBP	13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	AFF1	P51825	1210 aa	Known RBP	13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	TBX4	P57082	545 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	SLC13A2	Q13183	592 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	KRR1	Q13601	381 aa	Known RBP	13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	UBE2U	Q5VVX9	321 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	KDM4D	Q6B0I6	523 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	LAIR1	Q6GTX8	287 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	GALNT5	Q7Z7M9	940 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	LRRTM3	Q86VH5	581 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	CYP4Z1	Q86W10	505 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	ZNF540	Q8NDQ6	660 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	EEF1AKMT1	Q8WVE0	214 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	HTRA1	Q92743	480 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	KCNJ9	Q92806	393 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	SIGLEC11	Q96RL6	698 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	DPY30	Q9C005	99 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	DCSTAMP	Q9H295	470 aa		13.47	□□□□□ -0.25
UBE2F-223	ENST00000612130	MIOS	Q9NXC5	875 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms