RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 INTS10Q9NVR2 710 aaKnown RBP11.99□□□□□ -0.49
CBWD3-208ENST00000612050 LNPEPQ9UIQ6 1025 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 PRSS21Q9Y6M0 314 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 RPS6KL1Q9Y6S9 549 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
CBWD3-208ENST00000612050 SLC5A10A0PJK1 596 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 PIPSLA2A3N6 862 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 TK2O00142 265 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 KIF1CO43896 1103 aaKnown RBP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 CHRM3P20309 590 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 RPS3P23396 243 aaKnown RBP eCLIP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 DR1Q01658 176 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 PTK6Q13882 451 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 TTLL9Q3SXZ7 439 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 NEPROQ6NW34 567 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 C6orf15Q6UXA7 325 aaPredicted RBP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 UNC5DQ6UXZ4 953 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 VASH2Q86V25 355 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 DCUN1D3Q8IWE4 304 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 SLC22A15Q8IZD6 547 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 CFAP61Q8NHU2 1237 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 SNRNP27Q8WVK2 155 aaKnown RBP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 ELMO2Q96JJ3 720 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 SLC41A2Q96JW4 573 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 DDX47Q9H0S4 455 aaKnown RBP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 FGF21Q9NSA1 209 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 SIDT1Q9NXL6 827 aaKnown RBP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 OR6C2Q9NZP2 312 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 PCYOX1Q9UHG3 505 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 POMT2Q9UKY4 750 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 SLC39A10Q9ULF5 831 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 TMEM184BQ9Y519 407 aaPredicted RBP11.98□□□□□ -0.49
CBWD3-208ENST00000612050 DMXL2Q8TDJ6 3036 aa11.98□□□□□ -0.49
CBWD3-208ENST00000612050 IGHV5-51A0A0C4DH38 117 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 TCRBV7S3A2A0A539 114 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 ZNF891A8MT65 544 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 DNALI1O14645 258 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 ATXN7O15265 892 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 EFSO43281 561 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 AVILO75366 819 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 USP1O94782 785 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 TTC4O95801 387 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 FGF5P12034 268 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 CCR7P32248 378 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 CCNFP41002 786 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 ARCN1P48444 511 aaKnown RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 TUBB4BP68371 445 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 SH3BP2P78314 561 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 TUBB2AQ13885 445 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 LONRF1Q17RB8 773 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 PLEKHS1Q5SXH7 462 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 PAPD7Q5XG87 772 aaKnown RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 ZNF470Q6ECI4 717 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 CES3Q6UWW8 571 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 XKR5Q6UX68 686 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 LDB1Q86U70 411 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 TMEM126BQ8IUX1 230 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 KLHL7Q8IXQ5 586 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 PDIK1LQ8N165 341 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 OR5AR1Q8NGP9 310 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 SLCO2A1Q92959 643 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 WBP1Q96G27 269 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 CATSPER2Q96P56 530 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 FAM167BQ9BTA0 163 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 TUBB2BQ9BVA1 445 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 APMAPQ9HDC9 416 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 C20orf96Q9NUD7 363 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 INTS7Q9NVH2 962 aaKnown RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 ACTR10Q9NZ32 417 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 SEMA5BQ9P283 1151 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 MARCH4Q9P2E8 410 aaPredicted RBP11.97□□□□□ -0.49
CBWD3-208ENST00000612050 SERTAD3Q9UJW9 196 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 KCND3Q9UK17 655 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 PILRAQ9UKJ1 303 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 COMMD10Q9Y6G5 202 aa11.97□□□□□ -0.49
CBWD3-208ENST00000612050 USP27XA6NNY8 438 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 ISM1B1AKI9 464 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 BTN3A1O00481 513 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 CPNE3O75131 537 aaKnown RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 SPAG6O75602 509 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 KIAA0754O94854 1291 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 TMEM63AO94886 807 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 ITGB2P05107 769 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 KLK3P07288 261 aaPredicted RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 SFTPCP11686 197 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 PGAM1P18669 254 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 AOAHP28039 575 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 PRDX3P30048 256 aaKnown RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 CASQ1P31415 396 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 FMO4P31512 558 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 KPNA2P52292 529 aaKnown RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 ADARP55265 1226 aaKnown RBP11.96□□□□□ -0.49
CBWD3-208ENST00000612050 SEMA3AQ14563 771 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 TYSND1Q2T9J0 566 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 ANKRD20A4Q4UJ75 823 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 ANKRD22Q5VYY1 191 aa11.96□□□□□ -0.49
CBWD3-208ENST00000612050 IZUMO3Q5VZ72 239 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms