RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	C18orf21	Q32NC0	220 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	TRIM40	Q6P9F5	258 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	MBOAT1	Q6ZNC8	495 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	AKAP14	Q86UN6	197 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	CACTIN-AS1	Q8N1I8	211 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	MARVELD2	Q8N4S9	558 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	KRTCAP2	Q8N6L1	136 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	SMYD1	Q8NB12	490 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	NFKBIZ	Q9BYH8	718 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	N6AMT1	Q9Y5N5	214 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	UGT2B11	O75310	529 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	RPLP2	P05387	115 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	ELFN1	P0C7U0	828 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	CYP2A6	P11509	494 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	GLDC	P23378	1020 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	NFKB2	Q00653	900 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	TAF1A	Q15573	450 aa	Predicted RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	C6orf183	Q5T699	404 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	SPRYD7	Q5W111	196 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	STEAP4	Q687X5	459 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	RAVER1	Q8IY67	606 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	DPP10	Q8N608	796 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	CNIH3	Q8TBE1	160 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	ARMC5	Q96C12	935 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	HIPK3	Q9H422	1215 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	RPF2	Q9H7B2	306 aa	Known RBP	13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	NKIRAS2	Q9NYR9	191 aa		13.6	□□□□□ -0.23
MUC1-223	ENST00000611571	ZNF99	A8MXY4	864 aa	Predicted RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571		H3BM21	787 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CLIC1	O00299	241 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	NME4	O00746	187 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	PTGES	O14684	152 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	GPR39	O43194	453 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	STATH	P02808	62 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CDKN1C	P49918	316 aa	Predicted RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	GATM	P50440	423 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ATP12A	P54707	1039 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CDH4	P55283	916 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	RAB39A	Q14964	217 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	FAM131A	Q6UXB0	335 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	AGMO	Q6ZNB7	445 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	NUDT18	Q6ZVK8	323 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	RBM23	Q86U06	439 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	DEPDC4	Q8N2C3	294 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	SMG8	Q8ND04	991 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	SYNDIG1	Q9H7V2	258 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CD320	Q9NPF0	282 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	AASDHPPT	Q9NRN7	309 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	PTGFRN	Q9P2B2	879 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	PSME2	Q9UL46	239 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	MICAL3	Q7RTP6	2002 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	EFCAB9	A8MZ26	197 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571		K7EPI3	171 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	SGTA	O43765	313 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	S1PR4	O95977	384 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	F2	P00734	622 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ITGB1	P05556	798 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CAPN3	P20807	821 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	HKDC1	Q2TB90	917 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ATAD3B	Q5T9A4	648 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	SERPINA13P	Q6UXR4	307 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CYP2U1	Q7Z449	544 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CMTR2	Q8IYT2	770 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	HS3ST5	Q8IZT8	346 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	KLHL23	Q8NBE8	558 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	FBXO22	Q8NEZ5	403 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ATL1	Q8WXF7	558 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	TADA1	Q96BN2	335 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CLIP3	Q96DZ5	547 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	GFM1	Q96RP9	751 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CNPPD1	Q9BV87	410 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	INTS10	Q9NVR2	710 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	OSER1	Q9NX31	292 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	DYTN	A2CJ06	578 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	EDNRB	P24530	442 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	EEFSEC	P57772	596 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	HSPB3	Q12988	150 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	OR4D1	Q15615	310 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	SULT1C3	Q6IMI6	304 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	KRT74	Q7RTS7	529 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ADGRG6	Q86SQ4	1221 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	LRRTM3	Q86VH5	581 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	C11orf65	Q8NCR3	313 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ZNF558	Q96NG5	402 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ZCCHC2	Q9C0B9	1178 aa	Known RBP	13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	FAM83D	Q9H4H8	585 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	CCNB1IP1	Q9NPC3	277 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	AASS	Q9UDR5	926 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	AP3M1	Q9Y2T2	418 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	TIAM2	Q8IVF5	1701 aa		13.59	□□□□□ -0.23
MUC1-223	ENST00000611571	ALDH1A2	O94788	518 aa		13.58	□□□□□ -0.23
MUC1-223	ENST00000611571	TGFB1	P01137	390 aa		13.58	□□□□□ -0.23
MUC1-223	ENST00000611571	CSK	P41240	450 aa		13.58	□□□□□ -0.23
MUC1-223	ENST00000611571	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.58	□□□□□ -0.23
MUC1-223	ENST00000611571	CES5A	Q6NT32	575 aa		13.58	□□□□□ -0.23
MUC1-223	ENST00000611571	KLHL35	Q6PF15	583 aa		13.58	□□□□□ -0.23

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