RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 NUDCQ9Y266 331 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 GRIP1Q9Y3R0 1128 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 CLIC4Q9Y696 253 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 MROH2AA6NES4 1674 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 CLTCQ00610 1675 aaKnown RBP3.23□□□□□ -1.89
ZEB1-224ENST00000606161 ASXL1Q8IXJ9 1541 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 PARD3Q8TEW0 1356 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 NPC1L1Q9UHC9 1359 aa3.23□□□□□ -1.89
ZEB1-224ENST00000606161 ERVK-7P63135 1459 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NRXN1Q9ULB1 1477 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NPHP3Q7Z494 1330 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 A0A0U1RQF3 1178 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 A0A1W2PPW3 197 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SLC9B1P1A6NJY1 282 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 FOXO6A8MYZ6 492 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 E5RJQ4 531 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 M0QZ24 198 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 MEIS2O14770 477 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 IKBKBO14920 756 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SPRY1O43609 319 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 TLR2O60603 784 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NEURL1O76050 574 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 CAMTA2O94983 1202 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 TRIM16O95361 564 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ALPPP05187 535 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ALPPL2P10696 532 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 GHRP10912 638 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ADRA2CP18825 462 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 GNAZP19086 355 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 HOXD9P28356 352 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 HSD17B3P37058 310 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NR4A2P43354 598 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 GPC3P51654 580 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 CDH12P55289 794 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 CDK3Q00526 305 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 KLHL30Q0D2K2 578 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 STIM1Q13586 685 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 PDK1Q15118 436 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 CCDC40Q4G0X9 1142 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SGO1Q5FBB7 561 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 RNASEH2BQ5TBB1 312 aaKnown RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 GALNT17Q6IS24 598 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 EXOC3L1Q86VI1 746 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SFTPA2Q8IWL1 248 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SLC35F3Q8IY50 421 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 RYBPQ8N488 228 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SPATA6LQ8N4H0 392 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 EMC1Q8N766 993 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 HORMAD2Q8N7B1 307 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 MRPL43Q8N983 215 aaKnown RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 LRRC57Q8N9N7 239 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ZBTB44Q8NCP5 570 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 PAPD5Q8NDF8 572 aaKnown RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 CNNM3Q8NE01 707 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 DENND6BQ8NEG7 585 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 FBXO30Q8TB52 745 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SPATA18Q8TC71 538 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SLC35F5Q8WV83 523 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 HEXDCQ8WVB3 486 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SLC13A3Q8WWT9 602 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ADAMTS14Q8WXS8 1223 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SNAPC3Q92966 411 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 CENPTQ96BT3 561 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NLRP4Q96MN2 994 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 LRRC3BQ96PB8 259 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 TSGA13Q96PP4 275 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 KLHL5Q96PQ7 755 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 MMTAG2Q9BU76 263 aaKnown RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 FRMD8Q9BZ67 464 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ZNF350Q9GZX5 532 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 LHPPQ9H008 270 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 SNX25Q9H3E2 840 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 PIGMQ9H3S5 423 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 MVB12BQ9H7P6 319 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 PNRC2Q9NPJ4 139 aaKnown RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ACSS1Q9NUB1 689 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ASIC5Q9NY37 505 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 AATFQ9NY61 560 aaKnown RBP eCLIP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 FETUBQ9UGM5 382 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 APPL1Q9UKG1 709 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 RPH3AQ9Y2J0 694 aaPredicted RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 STRAPQ9Y3F4 350 aaKnown RBP3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NFE2L3Q9Y4A8 694 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 QRICH2Q9H0J4 1663 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ARHGEF40Q8TER5 1519 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NSD2O96028 1365 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 INSRP06213 1382 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 TNRQ92752 1358 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 NOTCH4Q99466 2003 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 PIK3C2BO00750 1634 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 MYO3AQ8NEV4 1616 aa3.22□□□□□ -1.89
ZEB1-224ENST00000606161 ZNF541Q9H0D2 1346 aa3.21□□□□□ -1.89
ZEB1-224ENST00000606161 SMG6Q86US8 1419 aaKnown RBP3.21□□□□□ -1.9
ZEB1-224ENST00000606161 RIMS2Q9UQ26 1411 aa3.21□□□□□ -1.9
ZEB1-224ENST00000606161 NEXMIFQ5QGS0 1516 aa3.21□□□□□ -1.9
ZEB1-224ENST00000606161 TRBV2A0A0J9YWF9 115 aa3.21□□□□□ -1.9
ZEB1-224ENST00000606161 A0A1W2PR77 199 aa3.21□□□□□ -1.9
ZEB1-224ENST00000606161 SMIM30A4D0T7 59 aa3.21□□□□□ -1.9
ZEB1-224ENST00000606161 ARHGAP42A6NI28 874 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms