RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CENPUQ71F23 418 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 NLRP9Q7RTR0 991 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 CREG2Q8IUH2 290 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 IGDCC3Q8IVU1 814 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 SLC22A15Q8IZD6 547 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 NLGN4XQ8N0W4 816 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 LINC01555Q8NAE3 123 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 PPHLN1Q8NEY8 458 aaKnown RBP10.35□□□□□ -0.75
TUBE1-210ENST00000604967 NLGN4YQ8NFZ3 816 aaPredicted RBP10.35□□□□□ -0.75
TUBE1-210ENST00000604967 MAIP1Q8WWC4 291 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 LCN9Q8WX39 176 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 LPGAT1Q92604 370 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 PEX13Q92968 403 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 ZNF501Q96CX3 271 aaPredicted RBP10.35□□□□□ -0.75
TUBE1-210ENST00000604967 SIGLEC10Q96LC7 697 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 SERPINB12Q96P63 405 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 TEFMQ96QE5 360 aaKnown RBP10.35□□□□□ -0.75
TUBE1-210ENST00000604967 OR2A14Q96R47 310 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 PITPNM3Q9BZ71 974 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 IL22Q9GZX6 179 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 MRM3Q9HC36 420 aaKnown RBP10.35□□□□□ -0.75
TUBE1-210ENST00000604967 FAM60AQ9NP50 221 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 BTRCQ9Y297 605 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
TUBE1-210ENST00000604967 KLHL33A6NCF5 533 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 H3BMH7 237 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 LIN7AO14910 233 aaPredicted RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 NRP2O60462 931 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 NIPSNAP2O75323 286 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 SLCO2B1O94956 709 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 FAM87AP0C7U9 286 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 OAS2P29728 719 aaKnown RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 YBX1P67809 324 aaKnown RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 PRAMEP78395 509 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 CDK16Q00536 496 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 TIAL1Q01085 375 aaKnown RBP eCLIP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 TUBB3Q13509 450 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 GBX1Q14549 363 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 TYSND1Q2T9J0 566 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 FASTKD1Q53R41 847 aaKnown RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 RNASEH2BQ5TBB1 312 aaKnown RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 ZNF549Q6P9A3 640 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 FAM199XQ6PEV8 388 aaPredicted RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 CDHR3Q6ZTQ4 885 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 TMEM135Q86UB9 458 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 OOSP2Q86WS3 158 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 DENND6AQ8IWF6 608 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 OR1L3Q8NH93 324 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 GIMAP7Q8NHV1 300 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 UBXN4Q92575 508 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 FAM136AQ96C01 138 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 LRRC45Q96CN5 670 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 PWWP2AQ96N64 755 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 IL17FQ96PD4 163 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 TRAPPC9Q96Q05 1148 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 CARD6Q9BX69 1037 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 ULBP3Q9BZM4 244 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 DDX47Q9H0S4 455 aaKnown RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 SRMSQ9H3Y6 488 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 MVB12BQ9H7P6 319 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 KLHL20Q9Y2M5 609 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 COLEC10Q9Y6Z7 277 aa10.34□□□□□ -0.75
TUBE1-210ENST00000604967 SNRNP200O75643 2136 aaKnown RBP10.34□□□□□ -0.75
TUBE1-210ENST00000604967 PRMT5O14744 637 aaPredicted RBP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 S1PR4O95977 384 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 FTH1P02794 183 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 NTRK1P04629 796 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 OR56A5P0C7T3 313 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 UGT2B7P16662 529 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 HSD11B2P80365 405 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 NFKB2Q00653 900 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 HSPA14Q0VDF9 509 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 GPS2Q13227 327 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 IL11RAQ14626 422 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 ANKRD20A4Q4UJ75 823 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 PAPD7Q5XG87 772 aaKnown RBP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 KIAA0930Q6ICG6 404 aaPredicted RBP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 C4orf22Q6V702 233 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 AMIGO1Q86WK6 493 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 C2orf73Q8N5S3 287 aaPredicted RBP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 IL22RA1Q8N6P7 574 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 SIDT2Q8NBJ9 832 aaKnown RBP10.33□□□□□ -0.76
TUBE1-210ENST00000604967 MCUQ8NE86 351 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 OR5K2Q8NHB8 316 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 DENND1AQ8TEH3 1009 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 CT55Q8WUE5 264 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 SLC45A3Q96JT2 553 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 CD180Q99467 661 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 ZPBPQ9BS86 351 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 SYNPO2LQ9H987 977 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 FGF21Q9NSA1 209 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 HOMER3Q9NSC5 361 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 ACTR10Q9NZ32 417 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 BFARQ9NZS9 450 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 SLC17A6Q9P2U8 582 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 CROTQ9UKG9 612 aa10.33□□□□□ -0.76
TUBE1-210ENST00000604967 ASF1AQ9Y294 204 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms